Gene detail information of Glyur000267s00016666.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G03500.1 | 1.00E-92 | Homeodomain-like superfamily protein |
| NR | XP_003525655.1 | 0 | PREDICTED: uncharacterized protein LOC100807925 [Glycine max] |
| Swissprot | tr|Q8GUN5|PHL1_ARATH | 2.00E-13 | Protein PHR1-LIKE 1 |
| trEMBL | tr|I1K1C4|I1K1C4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G08150.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00267 | 55500 | 58543 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000267s00016666.1 | PF00249.26 | Myb_DNA-binding | 274 | 325 | 2.30E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.266 |
| SRR1783600 | control | 3.324 |
| SRR1783602 | moderate drought stress | 3.414 |
| SRR1811619 | moderate drought stress | 3.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.766 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.762 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.805 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.862 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.836 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.761 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.175 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.244 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 7.099 |
| SRR2868004 | Drought Stress(Tissue:root) | 8.347 |
| SRR2967015 | Control (Tissue:root) | 10.153 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 6.022 |
| SRR9715740 | Leave | 5.551 |
| SRR9715741 | Leave | 5.099 |
| SRR9715739 | Root | 0.822 |
| SRR9715742 | Root | 6.901 |
| SRR9715743 | Root | 6.349 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.453 |
| SRR8749028 | MeJA induced 9h | 0.620 |
| SRR8749029 | MeJA induced 9h | 0.645 |
| SRR8749030 | Uninduced | 0.711 |
| SRR8749031 | Uninduced | 0.154 |
| SRR8749032 | Uninduced | 0.193 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 4.300 |
| SRR8400027 | Control-Root | 4.858 |