Gene detail information of Glyur000267s00016668.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G26730.10Leucine-rich repeat protein kinase family protein
NRXP_004508557.10PREDICTED: probable inactive receptor kinase At2g26730-like [Cicer arietinum]
COGYP_004775215.11.00E-20RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|O48788|Y2267_ARATH0Probable inactive receptor kinase At2g26730 (Precursor)
trEMBLtr|I1MUE2|I1MUE2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G12880.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002677381277625-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.13.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000267s00016668.1PF08263.7LRRNT_225618.60E-07
Glyur000267s00016668.1PF12799.2LRR_4901279.00E-08
Glyur000267s00016668.1PF00560.28LRR_11391610.021
Glyur000267s00016668.1PF00069.20Pkinase3476075.10E-34


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.503
SRR1783600control15.824
SRR1783602moderate drought stress11.522
SRR1811619moderate drought stress11.472

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.942
DRR006520Root Summer glycyrrhizin high producing strain20.032
DRR006521Root Winter glycyrrhizin high producing strain8.089
DRR006522Root Winter glycyrrhizin high producing strain7.925
DRR006523Root Summer glycyrrhizin low producing strain13.350
DRR006524Root Summer glycyrrhizin low producing strain13.217
DRR006525Leaf Summer glycyrrhizin high producing strain14.294
DRR006526Leaf Summer glycyrrhizin high producing strain14.211

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)41.643
SRR2868004Drought Stress(Tissue:root)27.379
SRR2967015Control (Tissue:root)28.160

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave33.663
SRR9715740Leave13.095
SRR9715741Leave15.283
SRR9715739Root45.719
SRR9715742Root46.586
SRR9715743Root43.582

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h21.528
SRR8749028MeJA induced 9h14.054
SRR8749029MeJA induced 9h17.530
SRR8749030Uninduced1.842
SRR8749031Uninduced0.740
SRR8749032Uninduced2.085

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.725
SRR8400027Control-Root43.341

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved