Gene detail information of Glyur000267s00016675.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G21690.1 | 5.00E-79 | gibberellin 3-oxidase 3 |
| NR | XP_006476108.1 | 6.13E-117 | PREDICTED: gibberellin 3-beta-dioxygenase 3-like [Citrus sinensis] |
| COG | YP_007565700.1 | 4.00E-22 | putative oxidoreductase [Ilumatobacter coccineus YM16-304] |
| Swissprot | tr|Q9SVS8|G3OX3_ARATH | 4.00E-92 | Gibberellin 3-beta-dioxygenase 3 |
| trEMBL | tr|A0A067KBF6|A0A067KBF6_JATCU | 8.00E-115 | Uncharacterized protein {ECO:0000313|EMBL:KDP32333.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00267 | 107351 | 116001 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K04124 | E1.14.11.15 | EC:1.14.11.15 | Diterpenoid biosynthesis | map00904 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000267s00016675.1 | PF14226.1 | DIOX_N | 50 | 139 | 4.10E-13 |
| Glyur000267s00016675.1 | PF03171.15 | 2OG-FeII_Oxy | 196 | 292 | 1.40E-23 |
| Glyur000267s00016675.1 | PF14226.1 | DIOX_N | 375 | 462 | 1.70E-14 |
| Glyur000267s00016675.1 | PF03171.15 | 2OG-FeII_Oxy | 490 | 588 | 1.20E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.066 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.000 |
| SRR8400027 | Control-Root | 0.000 |