Gene detail information of Glyur000268s00013359.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G02810.15.00E-109pseudo-response regulator 7
NRKHN22021.10Two-component response regulator-like PRR37 [Glycine soja]
COGYP_004656894.11.00E-16response regulator receiver protein [Runella slithyformis DSM 19594]
Swissprottr|A2YQ93|PRR37_ORYSI2.00E-134Two-component response regulator-like PRR37
trEMBLtr|G7JRK3|G7JRK3_MEDTR0PRR response regulator {ECO:0000313|EMBL:AES88725.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002682365232818+


Gene family

Gene familysubfamily
Transcription Factors FamilyPseudo ARR-B


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0000160  phosphorelay signal transduction system


molecular_function

GO:0005515  protein binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000268s00013359.1PF00072.19Response_reg1392507.20E-22
Glyur000268s00013359.1PF06203.9CCT7688106.10E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control36.385
SRR1783600control36.811
SRR1783602moderate drought stress39.100
SRR1811619moderate drought stress38.830

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain60.805
DRR006520Root Summer glycyrrhizin high producing strain60.554
DRR006521Root Winter glycyrrhizin high producing strain54.295
DRR006522Root Winter glycyrrhizin high producing strain53.374
DRR006523Root Summer glycyrrhizin low producing strain76.229
DRR006524Root Summer glycyrrhizin low producing strain75.900
DRR006525Leaf Summer glycyrrhizin high producing strain165.041
DRR006526Leaf Summer glycyrrhizin high producing strain163.709

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)85.242
SRR2868004Drought Stress(Tissue:root)73.522
SRR2967015Control (Tissue:root)130.595

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave132.373
SRR9715740Leave157.952
SRR9715741Leave168.464
SRR9715739Root1.988
SRR9715742Root16.645
SRR9715743Root12.594

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h58.388
SRR8749028MeJA induced 9h58.709
SRR8749029MeJA induced 9h88.648
SRR8749030Uninduced60.464
SRR8749031Uninduced84.355
SRR8749032Uninduced63.609

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.189
SRR8400027Control-Root18.689

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved