Gene detail information of Glyur000268s00013361.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G07870.2 | 4.00E-163 | Protein kinase superfamily protein |
| NR | XP_003539745.1 | 0 | PREDICTED: probable serine/threonine-protein kinase RLCKVII-like [Glycine max] |
| COG | YP_003510864.1 | 3.00E-25 | serine/threonine protein kinase with PASTA sensor(s) [Stackebrandtia nassauensis DSM 44728] |
| Swissprot | tr|Q9LQQ8|RLCK7_ARATH | 0 | Probable serine/threonine-protein kinase RLCKVII |
| trEMBL | tr|I1LR21|I1LR21_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G07870.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00268 | 39927 | 43664 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.2.2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000268s00013361.1 | PF00069.20 | Pkinase | 93 | 354 | 1.10E-43 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.057 |
| SRR1783600 | control | 5.063 |
| SRR1783602 | moderate drought stress | 4.000 |
| SRR1811619 | moderate drought stress | 4.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.866 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.906 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.597 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.426 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.398 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.381 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.370 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.247 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 7.768 |
| SRR2868004 | Drought Stress(Tissue:root) | 16.817 |
| SRR2967015 | Control (Tissue:root) | 12.115 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 12.789 |
| SRR9715740 | Leave | 15.124 |
| SRR9715741 | Leave | 19.283 |
| SRR9715739 | Root | 4.891 |
| SRR9715742 | Root | 7.383 |
| SRR9715743 | Root | 6.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.544 |
| SRR8749028 | MeJA induced 9h | 27.913 |
| SRR8749029 | MeJA induced 9h | 57.322 |
| SRR8749030 | Uninduced | 13.386 |
| SRR8749031 | Uninduced | 37.403 |
| SRR8749032 | Uninduced | 33.329 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 5.481 |
| SRR8400027 | Control-Root | 4.773 |