Gene detail information of Glyur000269s00013898.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G50420.10scarecrow-like 3
NRXP_004517294.10PREDICTED: scarecrow-like protein 3-like [Cicer arietinum]
Swissprottr|Q9LPR8|SCL3_ARATH0Scarecrow-like protein 3
trEMBLtr|G7K9A5|G7K9A5_MEDTR0GRAS family transcription factor {ECO:0000313|EMBL:AES93930.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00269106608108035-


Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

cellular_component

GO:0005634  nucleus


molecular_function

GO:0000989  transcription factor activity, transcription factor binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000269s00013898.1PF03514.9GRAS504721.90E-139


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.614
SRR1783600control16.618
SRR1783602moderate drought stress14.713
SRR1811619moderate drought stress11.378

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.354
DRR006520Root Summer glycyrrhizin high producing strain11.109
DRR006521Root Winter glycyrrhizin high producing strain14.280
DRR006522Root Winter glycyrrhizin high producing strain14.146
DRR006523Root Summer glycyrrhizin low producing strain14.481
DRR006524Root Summer glycyrrhizin low producing strain14.237
DRR006525Leaf Summer glycyrrhizin high producing strain11.257
DRR006526Leaf Summer glycyrrhizin high producing strain11.052

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)25.326
SRR2868004Drought Stress(Tissue:root)29.973
SRR2967015Control (Tissue:root)30.785

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.988
SRR9715740Leave11.643
SRR9715741Leave10.815
SRR9715739Root9.359
SRR9715742Root14.411
SRR9715743Root14.173

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h19.682
SRR8749028MeJA induced 9h8.879
SRR8749029MeJA induced 9h8.471
SRR8749030Uninduced4.850
SRR8749031Uninduced2.136
SRR8749032Uninduced2.419

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.753
SRR8400027Control-Root13.985

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved