Gene detail information of Glyur000269s00013919.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G10960.13.00E-163UDP-D-glucose/UDP-D-galactose 4-epimerase 5
NRXP_003517510.10PREDICTED: UDP-glucose 4-epimerase GEPI48-like isoform X1 [Glycine max]
COGYP_004645070.11.00E-145protein GalE [Paenibacillus mucilaginosus KNP414]
Swissprottr|O65781|GALE2_CYATE0UDP-glucose 4-epimerase GEPI48
trEMBLtr|I1JAE3|I1JAE3_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G43540.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00269193836198559+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01784galE, GALE EC:5.1.3.2 Galactose metabolism map00052
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

biological_process

GO:0006012  galactose metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0003978  UDP-glucose 4-epimerase activity

GO:0050662  coenzyme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000269s00013919.1PF01370.16Epimerase473089.00E-54
Glyur000269s00013919.1PF13950.1Epimerase_Csub3213823.00E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control20.676
SRR1783600control20.727
SRR1783602moderate drought stress33.349
SRR1811619moderate drought stress33.260

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain55.822
DRR006520Root Summer glycyrrhizin high producing strain55.697
DRR006521Root Winter glycyrrhizin high producing strain227.567
DRR006522Root Winter glycyrrhizin high producing strain222.309
DRR006523Root Summer glycyrrhizin low producing strain100.918
DRR006524Root Summer glycyrrhizin low producing strain100.523
DRR006525Leaf Summer glycyrrhizin high producing strain17.609
DRR006526Leaf Summer glycyrrhizin high producing strain17.319

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)46.500
SRR2868004Drought Stress(Tissue:root)90.450
SRR2967015Control (Tissue:root)112.301

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave45.590
SRR9715740Leave36.004
SRR9715741Leave54.384
SRR9715739Root42.535
SRR9715742Root78.108
SRR9715743Root67.623

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h88.859
SRR8749028MeJA induced 9h233.958
SRR8749029MeJA induced 9h140.225
SRR8749030Uninduced106.397
SRR8749031Uninduced189.018
SRR8749032Uninduced174.854

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root53.813
SRR8400027Control-Root57.470

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved