Gene detail information of Glyur000270s00013297.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G09970.10Leucine-rich receptor-like protein kinase family protein
NRXP_003593346.10Receptor-like protein kinase HAIKU2 [Medicago truncatula]
COGYP_004775215.13.00E-53RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9LJM4|IKU2_ARATH0Receptor-like protein kinase HAIKU2 (Precursor)
trEMBLtr|G7IFB9|G7IFB9_MEDTR0LRR receptor-like kinase family protein {ECO:0000313|EMBL:AES63597.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00270169298173514+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000270s00013297.1PF08263.7LRRNT_234741.40E-08
Glyur000270s00013297.1PF00560.28LRR_11271470.29
Glyur000270s00013297.1PF00560.28LRR_12012230.67
Glyur000270s00013297.1PF12799.2LRR_42252611.20E-06
Glyur000270s00013297.1PF13516.1LRR_63183351.5
Glyur000270s00013297.1PF13855.1LRR_84645233.00E-09
Glyur000270s00013297.1PF13516.1LRR_65345551.2
Glyur000270s00013297.1PF00069.20Pkinase6809609.30E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.298
SRR1783600control11.270
SRR1783602moderate drought stress12.352
SRR1811619moderate drought stress12.188

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.132
DRR006520Root Summer glycyrrhizin high producing strain4.992
DRR006521Root Winter glycyrrhizin high producing strain7.018
DRR006522Root Winter glycyrrhizin high producing strain6.801
DRR006523Root Summer glycyrrhizin low producing strain19.213
DRR006524Root Summer glycyrrhizin low producing strain19.067
DRR006525Leaf Summer glycyrrhizin high producing strain0.451
DRR006526Leaf Summer glycyrrhizin high producing strain0.450

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.786
SRR2868004Drought Stress(Tissue:root)6.980
SRR2967015Control (Tissue:root)8.292

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.009
SRR9715740Leave4.398
SRR9715741Leave16.698
SRR9715739Root10.542
SRR9715742Root27.396
SRR9715743Root23.996

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.588
SRR8749028MeJA induced 9h7.590
SRR8749029MeJA induced 9h2.880
SRR8749030Uninduced5.527
SRR8749031Uninduced2.076
SRR8749032Uninduced2.759

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.902
SRR8400027Control-Root18.110

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved