Gene detail information of Glyur000270s00013299.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G14260.1 | 5.00E-162 | proline iminopeptidase |
| NR | XP_003545761.1 | 0 | PREDICTED: proline iminopeptidase-like [Glycine max] |
| COG | YP_004861800.1 | 3.00E-153 | prolyl aminopeptidase, serine peptidase, MEROPS family S33 [Candidatus Chloracidobacterium thermophilum B] |
| Swissprot | tr|P93732|PIP_ARATH | 0 | Proline iminopeptidase |
| trEMBL | tr|I1ME45|I1ME45_SOYBN | 0 | Proline iminopeptidase {ECO:0000256|RuleBase:RU003421} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00270 | 175318 | 180254 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01259 | pip | EC:3.4.11.5 | Arginine and proline metabolism | map00330 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000270s00013299.1 | PF00561.15 | Abhydrolase_1 | 129 | 365 | 1.40E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 61.260 |
| SRR1783600 | control | 61.379 |
| SRR1783602 | moderate drought stress | 61.294 |
| SRR1811619 | moderate drought stress | 60.878 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 94.920 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 93.696 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 109.375 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 108.348 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 65.510 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 65.160 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 26.742 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 26.527 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 69.761 |
| SRR2868004 | Drought Stress(Tissue:root) | 91.259 |
| SRR2967015 | Control (Tissue:root) | 104.826 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 50.720 |
| SRR9715740 | Leave | 60.393 |
| SRR9715741 | Leave | 67.496 |
| SRR9715739 | Root | 20.542 |
| SRR9715742 | Root | 56.334 |
| SRR9715743 | Root | 50.948 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 89.325 |
| SRR8749028 | MeJA induced 9h | 100.760 |
| SRR8749029 | MeJA induced 9h | 89.637 |
| SRR8749030 | Uninduced | 59.364 |
| SRR8749031 | Uninduced | 39.488 |
| SRR8749032 | Uninduced | 74.316 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 82.527 |
| SRR8400027 | Control-Root | 76.220 |