Gene detail information of Glyur000271s00015154.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G14950.10golgi alpha-mannosidase II
NRAES74599.20alpha-mannosidase 2x-like protein [Medicago truncatula]
COGYP_003986012.15.00E-11alpha-mannosidase [Gardnerella vaginalis ATCC 14019]
Swissprottr|C0HJB3|MANA_CANEN2.00E-86Alpha-mannosidase, light subunit {ECO:0000303|PubMed:24221485}
trEMBLtr|G7KJH1|G7KJH1_MEDTR0Alpha-mannosidase {ECO:0000256|RuleBase:RU361199}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002713969046111-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH38


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01231MAN2 EC:3.2.1.114 N-Glycan biosynthesis map00510
Various types of N-glycan biosynthesismap00513


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process

GO:0006013  mannose metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds

GO:0004559  alpha-mannosidase activity

GO:0008270  zinc ion binding

GO:0015923  mannosidase activity

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000271s00015154.1PF01074.17Glyco_hydro_381504896.30E-94
Glyur000271s00015154.1PF09261.6Alpha-mann_mid4955795.70E-18
Glyur000271s00015154.1PF07748.8Glyco_hydro_38C63911534.00E-71


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.898
SRR1783600control12.855
SRR1783602moderate drought stress11.476
SRR1811619moderate drought stress11.455

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.292
DRR006520Root Summer glycyrrhizin high producing strain9.251
DRR006521Root Winter glycyrrhizin high producing strain15.858
DRR006522Root Winter glycyrrhizin high producing strain15.203
DRR006523Root Summer glycyrrhizin low producing strain7.662
DRR006524Root Summer glycyrrhizin low producing strain7.722
DRR006525Leaf Summer glycyrrhizin high producing strain7.623
DRR006526Leaf Summer glycyrrhizin high producing strain7.532

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.303
SRR2868004Drought Stress(Tissue:root)15.001
SRR2967015Control (Tissue:root)14.028

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.746
SRR9715740Leave10.350
SRR9715741Leave10.102
SRR9715739Root8.536
SRR9715742Root16.161
SRR9715743Root15.035

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.976
SRR8749028MeJA induced 9h7.339
SRR8749029MeJA induced 9h1.902
SRR8749030Uninduced2.761
SRR8749031Uninduced1.298
SRR8749032Uninduced1.047

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.048
SRR8400027Control-Root16.193

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved