Gene detail information of Glyur000271s00015167.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G42740.10Sugar isomerase (SIS) family protein
NRXP_003554193.10PREDICTED: glucose-6-phosphate isomerase, cytosolic-like [Glycine max]
COGYP_005443733.11.00E-176glucose-6-phosphate isomerase [Caldilinea aerophila DSM 14535 = NBRC 104270]
Swissprottr|P54243|G6PI_OENME0Glucose-6-phosphate isomerase, cytosolic
trEMBLtr|K7MVZ6|K7MVZ6_SOYBN0Glucose-6-phosphate isomerase {ECO:0000256|RuleBase:RU000612}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00271139763148098-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01810GPI, pgi EC:5.3.1.9 Carbon metabolism map01200
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Starch and sucrose metabolismmap00500
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

biological_process

GO:0006094  gluconeogenesis

GO:0006096  glycolytic process


molecular_function

GO:0004347  glucose-6-phosphate isomerase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000271s00015167.1PF00342.14PGI515472.60E-215


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.718
SRR1783600control1.718
SRR1783602moderate drought stress1.921
SRR1811619moderate drought stress2.001

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.011
DRR006520Root Summer glycyrrhizin high producing strain1.944
DRR006521Root Winter glycyrrhizin high producing strain1.473
DRR006522Root Winter glycyrrhizin high producing strain1.382
DRR006523Root Summer glycyrrhizin low producing strain7.239
DRR006524Root Summer glycyrrhizin low producing strain7.279
DRR006525Leaf Summer glycyrrhizin high producing strain8.792
DRR006526Leaf Summer glycyrrhizin high producing strain8.720

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.298
SRR2868004Drought Stress(Tissue:root)12.589
SRR2967015Control (Tissue:root)9.958

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.757
SRR9715740Leave1.751
SRR9715741Leave1.738
SRR9715739Root0.972
SRR9715742Root1.616
SRR9715743Root0.988

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h39.602
SRR8749028MeJA induced 9h41.542
SRR8749029MeJA induced 9h55.737
SRR8749030Uninduced89.367
SRR8749031Uninduced93.536
SRR8749032Uninduced91.109

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.472
SRR8400027Control-Root6.411

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved