Gene detail information of Glyur000271s00015176.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G28470.1 | 5.00E-60 | Duplicated homeodomain-like superfamily protein |
| NR | XP_004489482.1 | 2.93E-126 | PREDICTED: myb-related protein 308-like [Cicer arietinum] |
| Swissprot | tr|P20025|MYB38_MAIZE | 5.00E-57 | Myb-related protein Zm38 |
| trEMBL | tr|V7BZ62|V7BZ62_PHAVU | 4.00E-123 | Uncharacterized protein {ECO:0000313|EMBL:ESW23169.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00271 | 194285 | 196167 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000271s00015176.1 | PF00249.26 | Myb_DNA-binding | 14 | 74 | 5.80E-13 |
| Glyur000271s00015176.1 | PF00249.26 | Myb_DNA-binding | 81 | 123 | 9.30E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.110 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.109 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.110 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.093 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.001 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.001 |
| SRR2967015 | Control (Tissue:root) | 0.044 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.063 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.101 |
| SRR8749028 | MeJA induced 9h | 0.201 |
| SRR8749029 | MeJA induced 9h | 0.176 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.043 |
| SRR8400027 | Control-Root | 0.000 |