Gene detail information of Glyur000272s00017862.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G10510.26.00E-133AINTEGUMENTA-like 6
NRXP_003517351.10PREDICTED: AP2-like ethylene-responsive transcription factor AIL6-like [Glycine max]
Swissprottr|Q52QU2|AIL6_ARATH5.00E-172AP2-like ethylene-responsive transcription factor AIL6
trEMBLtr|I1J503|I1J503_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G02760.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00272167590172822+


Gene family

Gene familysubfamily
Transcription Factors FamilyAP2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000272s00017862.1PF00847.15AP22382948.20E-09
Glyur000272s00017862.1PF00847.15AP23373881.70E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.238
SRR1783600control1.174
SRR1783602moderate drought stress2.636
SRR1811619moderate drought stress2.626

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.010
DRR006520Root Summer glycyrrhizin high producing strain1.045
DRR006521Root Winter glycyrrhizin high producing strain2.527
DRR006522Root Winter glycyrrhizin high producing strain2.482
DRR006523Root Summer glycyrrhizin low producing strain3.446
DRR006524Root Summer glycyrrhizin low producing strain3.524
DRR006525Leaf Summer glycyrrhizin high producing strain0.245
DRR006526Leaf Summer glycyrrhizin high producing strain0.245

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.560
SRR2868004Drought Stress(Tissue:root)14.397
SRR2967015Control (Tissue:root)17.233

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.913
SRR9715740Leave0.000
SRR9715741Leave0.115
SRR9715739Root1.494
SRR9715742Root3.416
SRR9715743Root2.305

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h348.070
SRR8749028MeJA induced 9h86.884
SRR8749029MeJA induced 9h130.174
SRR8749030Uninduced26.910
SRR8749031Uninduced20.884
SRR8749032Uninduced12.234

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.750
SRR8400027Control-Root3.719

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved