Gene detail information of Glyur000273s00014648.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G46290.10hercules receptor kinase 1
NRXP_004487043.10PREDICTED: receptor-like protein kinase HERK 1-like [Cicer arietinum]
COGYP_008151634.14.00E-28hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2]
Swissprottr|Q9LX66|HERK_ARATH0Receptor-like protein kinase HERK 1 (Precursor)
trEMBLtr|G7IUA3|G7IUA3_MEDTR0Receptor-like kinase, putative {ECO:0000313|EMBL:AES67559.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002734935352692+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.3.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000273s00014648.1PF12819.2Malectin_like734251.50E-58
Glyur000273s00014648.1PF07714.12Pkinase_Tyr5387309.80E-48


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control40.678
SRR1783600control40.950
SRR1783602moderate drought stress44.774
SRR1811619moderate drought stress44.447

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain41.209
DRR006520Root Summer glycyrrhizin high producing strain41.048
DRR006521Root Winter glycyrrhizin high producing strain21.576
DRR006522Root Winter glycyrrhizin high producing strain20.836
DRR006523Root Summer glycyrrhizin low producing strain50.997
DRR006524Root Summer glycyrrhizin low producing strain50.925
DRR006525Leaf Summer glycyrrhizin high producing strain11.598
DRR006526Leaf Summer glycyrrhizin high producing strain11.505

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)81.502
SRR2868004Drought Stress(Tissue:root)81.080
SRR2967015Control (Tissue:root)81.844

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave24.405
SRR9715740Leave30.262
SRR9715741Leave31.700
SRR9715739Root52.086
SRR9715742Root69.620
SRR9715743Root65.870

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h44.935
SRR8749028MeJA induced 9h53.930
SRR8749029MeJA induced 9h34.509
SRR8749030Uninduced73.142
SRR8749031Uninduced26.646
SRR8749032Uninduced19.467

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root52.696
SRR8400027Control-Root49.629

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved