Gene detail

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Gene detail information of Glyur000273s00014662.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G07850.1	8.00E-145	Protein of unknown function (DUF604)
NR	XP_004487057.1	0	PREDICTED: uncharacterized protein LOC101496794 [Cicer arietinum]
trEMBL	tr\|K7M9J8\|K7M9J8_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA15G04860.2}

Sequence

Transcript Sequence

>Glyur000273s00014662.1
ATGTACTCTTCTTCCCATCAACGCATGCTCCACACAGGCTCCAAAAGCATCATCACTTGGTTGATCCTAATCACCATTGTACTCTACATCCTCTATTCTTCCAACCTCATCCTCTTCAACAATGATCAACAAGATTGCCCCACTACCACAACCAATTTAGATGACACCCCACAAGAACACGTTCACATCNCTAGCTATAACATATCCAGAACCACAGATACCACTGAAAGCCTTGAACAGAAAGAACCAATAAAAGAGAAAGAAAAAACAAAAGAGGATGAGGCAACAGAAGAAGAAGAAGAAGAAGCTCGTGAAGAAAAAACAACACAAGAAGAAGATGGTGAAGAAGAAGAAAACAAATCCCCGATTGTGGTTCGGTTAAGCCCCGAGCAAATGTCTCAGAGACAGGAAACAGAGCTCAAACACATTGTTTTTGGGATAGCAGCTTCATCGAATCTGTGGCACGTGAGAAAAGAATACATCAAGATATGGTGGAGGCCTAAACAAACAAGAGGGGTTGTGTGGTTGGACAAACACGTGAGGACCCGAAGGAACGAGGGGTGGTTCGTGATGGGGGATGATGACACGGTGTTTGTGGTGGATAATGTGGTCAGGATCCTCTCCAAGTATGACCATAGACACTTCTATTATGTTGGGAGCTCNTCCGAGAGCCATGTCCAGAACATACATTTCTCATATGCCATGGCATATGGTGGGGGAGGATTTGCCATTAGCTACCCGTTGGCCAAGGAGCTAGCAAAGATGCAAGATCGTTGCATTCAACGTTACCCTGCTNTGTATGGAAGTGATGATAGGATTCAAGCATGCATGGCTGAGCTAGGTGTGCCACTCACCAAGGAAGCTGGGTTTCACCAGTATGATGTGTATGGAGACTTACTAGGCCTTTTAGGGGCACACCCGGTGGCTCCACTAGTGTCCTTGCACCACCTTGATGTAGTGCAACCGATATTCCCAGGGATGACAAGGGTACAATCTCTGCGACACTTAATGGAATCCGTGAACCAGGACTCGGGCAGCATCATGCAGCAATCCATCTGCTACGACAAAAGCAGGTATTGGTCGATCTCTGTTTCGTGGGGCTACGTGGTTCAAATCCTGAGGGGAGTGTTGTCCCCTAGAGAGCTAGAGATGCCGTCGCGAACCTTCCTCAATTGGTATAAAAGAGCTGATTACACCGCATATGCATTCAACACAAGGCCCGTCGCTAAACACCCCTGCCAGAAGCCCTTTGTTTACTATGTGACCAAAACTCACTATGATTCGGCCACCAAACAAGTTGTTGGCGTTTATAATCGTGACAAATATTCCAAGTCTCCCTTCTGTCGGTGGAGAATGACTTCACCAGAGAAAATCACTTCTGTTTCACCAAGGAGGGACTGCTGTAGAGTTCTGCCAACACGGAAGAGCTCAAGCTCAACTCTTTACATATGGGTGGGCAATTGTCGAGAAGGCGAAGTTACTGAATTGTAG

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00273	126741	129731	+

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT31

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000273s00014662.1	PF04646.7	DUF604	227	461	2.70E-112

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.195
SRR1783600	control	0.187
SRR1783602	moderate drought stress	0.610
SRR1811619	moderate drought stress	0.569

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.032
DRR006520	Root Summer glycyrrhizin high producing strain	0.031
DRR006521	Root Winter glycyrrhizin high producing strain	0.210
DRR006522	Root Winter glycyrrhizin high producing strain	0.187
DRR006523	Root Summer glycyrrhizin low producing strain	0.318
DRR006524	Root Summer glycyrrhizin low producing strain	0.410
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.188
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.186

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.057
SRR2868004	Drought Stress(Tissue:root)	0.046
SRR2967015	Control (Tissue:root)	0.112

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.128
SRR9715740	Leave	0.181
SRR9715741	Leave	0.312
SRR9715739	Root	0.114
SRR9715742	Root	0.104
SRR9715743	Root	0.230

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.012
SRR8749028	MeJA induced 9h	0.100
SRR8749029	MeJA induced 9h	0.027
SRR8749030	Uninduced	0.071
SRR8749031	Uninduced	0.203
SRR8749032	Uninduced	0.273

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.074
SRR8400027	Control-Root	0.116