Gene detail information of Glyur000273s00014664.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G45770.16.00E-118Polyketide synthase, enoylreductase family protein
NRXP_003597280.10Trans-2-enoyl CoA reductase [Medicago truncatula]
COGYP_001877796.19.00E-39alcohol dehydrogenase [Akkermansia muciniphila ATCC BAA-835]
Swissprottr|Q8LCU7|MECR_ARATH4.00E-154Probable trans-2-enoyl-CoA reductase, mitochondrial (Precursor)
trEMBLtr|G7IU75|G7IU75_MEDTR0Zinc-binding alcohol dehydrogenase family protein {ECO:0000313|EMBL:AES67531.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00273142433145922+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K07512MECR, NRBF1 EC:1.3.1.38 Fatty acid metabolism map01212
Fatty acid elongationmap00062


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0008270  zinc ion binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000273s00014664.1PF08240.7ADH_N751427.50E-07
Glyur000273s00014664.1PF00107.21ADH_zinc_N1502761.40E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control45.264
SRR1783600control45.140
SRR1783602moderate drought stress51.631
SRR1811619moderate drought stress51.322

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain44.840
DRR006520Root Summer glycyrrhizin high producing strain42.869
DRR006521Root Winter glycyrrhizin high producing strain30.566
DRR006522Root Winter glycyrrhizin high producing strain29.144
DRR006523Root Summer glycyrrhizin low producing strain32.385
DRR006524Root Summer glycyrrhizin low producing strain31.595
DRR006525Leaf Summer glycyrrhizin high producing strain21.737
DRR006526Leaf Summer glycyrrhizin high producing strain20.890

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)51.391
SRR2868004Drought Stress(Tissue:root)52.104
SRR2967015Control (Tissue:root)40.084

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave34.132
SRR9715740Leave45.923
SRR9715741Leave38.174
SRR9715739Root37.336
SRR9715742Root35.229
SRR9715743Root37.481

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h48.141
SRR8749028MeJA induced 9h44.800
SRR8749029MeJA induced 9h39.644
SRR8749030Uninduced34.764
SRR8749031Uninduced13.721
SRR8749032Uninduced35.447

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root73.782
SRR8400027Control-Root73.706

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved