Gene detail information of Glyur000273s00014669.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G28550.33.00E-94related to AP2.7
NRXP_003542008.10PREDICTED: ethylene-responsive transcription factor RAP2-7-like isoform X1 [Glycine max]
Swissprottr|Q9SK03|RAP27_ARATH5.00E-107Ethylene-responsive transcription factor RAP2-7
trEMBLtr|I1M4P4|I1M4P4_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G40470.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00273176927180485+


Gene family

Gene familysubfamily
Transcription Factors FamilyAP2
EAR motif-containing ProteinsAP2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000273s00014669.1PF00847.15AP21542031.10E-14
Glyur000273s00014669.1PF00847.15AP22472971.30E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.556
SRR1783600control13.510
SRR1783602moderate drought stress8.302
SRR1811619moderate drought stress8.397

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.244
DRR006520Root Summer glycyrrhizin high producing strain19.568
DRR006521Root Winter glycyrrhizin high producing strain35.304
DRR006522Root Winter glycyrrhizin high producing strain35.156
DRR006523Root Summer glycyrrhizin low producing strain9.519
DRR006524Root Summer glycyrrhizin low producing strain9.948
DRR006525Leaf Summer glycyrrhizin high producing strain15.290
DRR006526Leaf Summer glycyrrhizin high producing strain15.523

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)53.566
SRR2868004Drought Stress(Tissue:root)76.555
SRR2967015Control (Tissue:root)71.828

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave37.300
SRR9715740Leave21.388
SRR9715741Leave28.662
SRR9715739Root6.838
SRR9715742Root18.156
SRR9715743Root16.092

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.769
SRR8749028MeJA induced 9h16.711
SRR8749029MeJA induced 9h13.184
SRR8749030Uninduced23.954
SRR8749031Uninduced29.983
SRR8749032Uninduced33.041

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root106.216
SRR8400027Control-Root133.066

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved