Gene detail information of Glyur000274s00012533.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G44830.10Lecithin:cholesterol acyltransferase family protein
NRCBI17099.30unnamed protein product [Vitis vinifera]
COGYP_001868565.13.00E-06GDSL family lipase [Nostoc punctiforme PCC 73102]
Swissprottr|Q9FYC7|PDAT2_ARATH0Putative phospholipid:diacylglycerol acyltransferase 2
trEMBLtr|F6GW64|F6GW64_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB44199.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00274660219511+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00679E2.3.1.158 EC:2.3.1.158 Glycerolipid metabolism map00561


Gene Ontology

biological_process

GO:0006629  lipid metabolic process


molecular_function

GO:0008374  O-acyltransferase activity

GO:0016788  hydrolase activity, acting on ester bonds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000274s00012533.1PF02450.10LCAT995281.10E-44
Glyur000274s00012533.1PF00657.17Lipase_GDSL64310141.10E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.179
SRR1783600control7.232
SRR1783602moderate drought stress8.731
SRR1811619moderate drought stress8.808

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.021
DRR006520Root Summer glycyrrhizin high producing strain10.731
DRR006521Root Winter glycyrrhizin high producing strain1.156
DRR006522Root Winter glycyrrhizin high producing strain1.148
DRR006523Root Summer glycyrrhizin low producing strain6.153
DRR006524Root Summer glycyrrhizin low producing strain5.974
DRR006525Leaf Summer glycyrrhizin high producing strain2.216
DRR006526Leaf Summer glycyrrhizin high producing strain2.137

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.989
SRR2868004Drought Stress(Tissue:root)5.051
SRR2967015Control (Tissue:root)5.735

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.939
SRR9715740Leave2.577
SRR9715741Leave1.378
SRR9715739Root4.453
SRR9715742Root4.371
SRR9715743Root4.312

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.444
SRR8749028MeJA induced 9h2.761
SRR8749029MeJA induced 9h4.022
SRR8749030Uninduced2.994
SRR8749031Uninduced0.653
SRR8749032Uninduced1.508

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.044
SRR8400027Control-Root7.735

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved