Gene detail information of Glyur000274s00012541.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G27930.1 | 1.00E-53 | PLATZ transcription factor family protein |
| NR | XP_004506088.1 | 1.61E-129 | PREDICTED: uncharacterized protein LOC101515457 [Cicer arietinum] |
| trEMBL | tr|I1LRA6|I1LRA6_SOYBN | 3.00E-125 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G08810.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00274 | 131170 | 132728 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | PLATZ |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000274s00012541.1 | PF04640.9 | PLATZ | 58 | 139 | 2.10E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.357 |
| SRR1783600 | control | 3.181 |
| SRR1783602 | moderate drought stress | 1.941 |
| SRR1811619 | moderate drought stress | 1.675 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.897 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.575 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.982 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.229 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.114 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.115 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 14.296 |
| SRR2868004 | Drought Stress(Tissue:root) | 10.658 |
| SRR2967015 | Control (Tissue:root) | 6.781 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.131 |
| SRR9715740 | Leave | 0.003 |
| SRR9715741 | Leave | 0.029 |
| SRR9715739 | Root | 2.772 |
| SRR9715742 | Root | 2.758 |
| SRR9715743 | Root | 3.039 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 18.957 |
| SRR8400027 | Control-Root | 20.266 |