Gene detail

Home
Network
Tools
- Search
- Blast
- Motif
- GSEA
- Heatmap Analysis
- JBrowse
Gene family
KEGG
Download
Help

Gene detail information of Glyur000275s00017059.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G32850.2	0	Protein kinase superfamily protein
NR	XP_004513162.1	0	PREDICTED: probable serine/threonine-protein kinase DDB_G0280111-like isoform X1 [Cicer arietinum]
COG	YP_008580265.1	2.00E-18	serine/threonine kinase [Leifsonia xyli subsp. cynodontis DSM 46306]
Swissprot	tr\|Q5KQF5\|CIPKM_ORYSJ	5.00E-21	CBL-interacting protein kinase 22
trEMBL	tr\|A0A072UVR8\|A0A072UVR8_MEDTR	0	Serine/Threonine kinase family protein {ECO:0000313\|EMBL:KEH33173.1}

Sequence

Transcript Sequence

>Glyur000275s00017059.1
CGAAATCTGAAGCAGCAGAAGCAGGAAGCTGGAAGCTCAATCCGTTGCGTTAATGGCGCACTGTTAGATTCGATTCGAACTTTTCAACAAACTTCTCGATCCCTTAATCCGGTGTGAACAGATCGATTGATTGAGGACGTGTTCTATTCGATTTGAGCTGAATTTCGGATTGAAGGATTTTCGGGAGCAATAAGGAGAAAATTTTCTCGCATTCTAGTCTATTTTTCCTAAAAAATGTGGAGATTTAAGCCATTCACGCACAAAGAGCCNTCTGGACTTGAAGGCCGTTCTATAGATGTTGGAAATCTCAAAATACATGTCCACAAGGCCATTGCTGAAGGAGGGTTCTCATGTGTCTACTTAGCTCGTGATGCTGTACATATGTCAAAACAATATGCTTTGAAGCACATAATATGCAATGATGAAGAATCACTTGGATTGGTAAAGAAGGAGATATCTGTGATGAAGTTGCTGGTAGGACATCCCAATGTTGTCACACTTCTTGCCCATGCAATTTATGATATGGGCAGGACAAAAGAGGCATTCCTTGTAATGGAATTTTGTGATAAGTCTCTGGTTAGTGTGCTGGAGAGCCGAGGAGCTGGTTATTTTGATGAGAAACAGGTTCTTTTAATCTTTAGGGATGTGTGTAATGCAGTTTTCGCTATGCACTGCCAGTCCCCACCTATTGCTCACCGAGACTTGAAAGCAGAGAATATTTTATTAAGTTCAGATGGTTTATGGAAGTTGTGTGATTTTGGAAGCACTTCTACCAATCACAAACGTTTTGAGAAGCCAGAAGAAATGGGGATTGAGGAAGACAATATCAGAAAGTACACAACCCCTGCCTACAGAGCCCCCGAGATGTGGGATTTGTTCTTGAGAGAAGTCATTAACGAGAAAGTGGACATATGGGCACTTGGGTGTCTCCTTTTTCGAATATGCTACTTCAAAAGTGCATTTGATGGGGAATCAAAGCTCCAAGTCTTAAATGGAAACTACCGCATTCCTGATATGCCTAAATACAGTTCATCTGTCACAGACTTGATCAGAGACATGCTTCAAGCTAGACCAGATGACAGACCAGATATCACGCAGGCAAGCGCTTTGCTTGATTGGCCATTCATCTCCATCAATTTAGGTTGGTGTGGTTTCGTGTTAACGAGCAGCTACCTATTGATTTACAAAAATCATTACCTGACAGGCCACCTGAGTCGCCCTCTACCAACAATCACGAAGGTGATNCAAGTTTTGACTAACATGATAAGTGCTTCAATGTCCACAAACAAATCATCTCCAATGCCTCGTAGGAATCCACCTCCTCCACCTTCACTTGGAGAACCCAAAACTACACCTCAGCCATCTCTTGCTTCTAGGGGAGGGGGGAATGGGGGGCAGCTTGGTGCTTTCTGGTCCACTCAGCATGCACAGAATTCACTTGTCCCTGAGGAAAANAGCAAACCTGTGTATGATGAAGAACCATCTAGCCACCAAATGCCATTGAAACATGACAGAATTCGTCCGGACAATGATCAGTTACCCAAAACTGTTGGTACTGACAAAGTGGTTAACACACAAACTCATACTGTAAAAAGCAGCATACATGGAAAATCACACAAGCCTGATACCAAATCTTCCAAGGACTTCGAAATAAATTTTTTTCCGGACAAAGATCATGCAAGTGAGAGGCGAATGCCAAGTATGGAGAATAATAACTTTCAAGACCAAGCTTTTAACACTTTTGTTGCAGAATTTGATACCACTAAGCTCAACTCTGGACTTGGTAACAAATCCACAAGGGAAGGAGCATTAGAGGCTGAGGTGGAGAAACTCAAAGAGCAGCTGAAGGAAGCTAACNTAGAGAAAGCTGAAATAACTTCCAAGTATGAAAAGCTTTCTGCTATATGCCGTTCACAAAGGCAAGAATTGCAGGATCTCAAGCAAGCACTTGCAGCAAGGACTCCATCTCCAAGTAGAGAGGGTTTAAGAACCTCTCCTGGAATTGCATCATCTGCATCTTTGAAGGAGAAGATTGGCGGGATTGCTCCGGAACTTCAGCAGAATAAAAGTGAATGGAAAACTCCTAGTTCAGAACCAAAGTCATGGCAAGCATTTCCGGAGGTACCCGAACCAGTAAAATCCCTTTCAGCAGACAATACTTCTAAATCTGTCAGGTCAAGAAATGGTCAGCAGAACAAGCAGGATACTCAGCTAGCTTCTGATTTTGATACATGGGGTTTTGGGACAGATCAATTCAGTGCTGTACGTGCTGGAAGCTCACAGATGCCAAGACCTAGTGAAGGGAGTAAAGCTCAGGTTTTTGGCGAGGCAAAGGCCTTTGAGAGCAAGTCAACCTCTCAACCTGCTGGATGGGCTGGTTTTTAACTATGGGAAAAGCTANAAGGGATCTATACTGTGATTGCACCGAGACATTTTTTTTTTGGATCCCTTATGGAGAAGTAAAAATGAGTGGAAACTTAATATATATATTATGTTTGATTCTTGTGGTTGGGTTTGTTTCCTTTTGTGGATCATGAAATGGTACATGTTTTCCTGGACTAAAGCTATTTTTGAGTTACGGTATTCATTTCCAGTTTNCATGATTGTTGCATTACTTATTAACTAATTTCATGTTTGTGTTAACGGGCTAGGGTCTAAGTGGAGCTTTNCACTTGTAGACCATACTTCCTGTTGATGATACTTGTTCTCCAACAAAAATGACGTCTTAGTTCACTCA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00275	139430	144291	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:5.1.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000275s00017059.1	PF00069.20	Pkinase	28	289	4.40E-43

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	34.636
SRR1783600	control	34.575
SRR1783602	moderate drought stress	29.908
SRR1811619	moderate drought stress	29.829

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	48.028
DRR006520	Root Summer glycyrrhizin high producing strain	47.393
DRR006521	Root Winter glycyrrhizin high producing strain	41.735
DRR006522	Root Winter glycyrrhizin high producing strain	40.797
DRR006523	Root Summer glycyrrhizin low producing strain	65.276
DRR006524	Root Summer glycyrrhizin low producing strain	64.877
DRR006525	Leaf Summer glycyrrhizin high producing strain	35.149
DRR006526	Leaf Summer glycyrrhizin high producing strain	34.943

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	58.492
SRR2868004	Drought Stress(Tissue:root)	64.277
SRR2967015	Control (Tissue:root)	54.895

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	65.239
SRR9715740	Leave	50.562
SRR9715741	Leave	78.014
SRR9715739	Root	6.819
SRR9715742	Root	33.437
SRR9715743	Root	29.287

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	57.569
SRR8749028	MeJA induced 9h	90.213
SRR8749029	MeJA induced 9h	67.428
SRR8749030	Uninduced	123.977
SRR8749031	Uninduced	135.708
SRR8749032	Uninduced	88.634

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	55.701
SRR8400027	Control-Root	60.601