Gene detail information of Glyur000276s00017154.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G24670.26.00E-136tryptophan aminotransferase related 2
NRXP_007138030.10hypothetical protein PHAVU_009G175300g [Phaseolus vulgaris]
COGYP_005269294.12.00E-10aminotransferase class I/II [Acetobacterium woodii DSM 1030]
Swissprottr|Q94A02|TAR2_ARATH3.00E-170Tryptophan aminotransferase-related protein 2
trEMBLtr|V7AWR7|V7AWR7_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW10024.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002763300137445+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K16903TAA1 EC:2.6.1.99 Tryptophan metabolism map00380


Gene Ontology

molecular_function

GO:0003824  catalytic activity

GO:0016846  carbon-sulfur lyase activity

GO:0030170  pyridoxal phosphate binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000276s00017154.2PF04864.8Alliinase_C13298.30E-137


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.237
SRR1783600control3.116
SRR1783602moderate drought stress5.889
SRR1811619moderate drought stress5.906

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.240
DRR006520Root Summer glycyrrhizin high producing strain6.199
DRR006521Root Winter glycyrrhizin high producing strain4.233
DRR006522Root Winter glycyrrhizin high producing strain4.504
DRR006523Root Summer glycyrrhizin low producing strain3.816
DRR006524Root Summer glycyrrhizin low producing strain3.657
DRR006525Leaf Summer glycyrrhizin high producing strain0.672
DRR006526Leaf Summer glycyrrhizin high producing strain0.698

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.145
SRR2868004Drought Stress(Tissue:root)7.367
SRR2967015Control (Tissue:root)11.166

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.021
SRR9715740Leave1.092
SRR9715741Leave1.019
SRR9715739Root0.186
SRR9715742Root1.872
SRR9715743Root2.320

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.731
SRR8749028MeJA induced 9h2.058
SRR8749029MeJA induced 9h0.321
SRR8749030Uninduced0.824
SRR8749031Uninduced0.161
SRR8749032Uninduced0.534

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.342
SRR8400027Control-Root5.774

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved