Gene detail information of Glyur000276s00017171.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G50180.15.00E-156Protein kinase superfamily protein
NRXP_003526999.10PREDICTED: serine/threonine-protein kinase HT1-like [Glycine max]
COGNP_623114.19.00E-30Serine/threonine protein kinase [Thermoanaerobacter tengcongensis MB4]
Swissprottr|Q2MHE4|HT1_ARATH8.00E-73Serine/threonine-protein kinase HT1
trEMBLtr|I1KCB5|I1KCB5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G18730.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00276155424159300+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.5


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000276s00017171.1PF07714.12Pkinase_Tyr302863.20E-59


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.002
SRR1783600control23.029
SRR1783602moderate drought stress27.943
SRR1811619moderate drought stress27.988

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain34.134
DRR006520Root Summer glycyrrhizin high producing strain34.216
DRR006521Root Winter glycyrrhizin high producing strain28.833
DRR006522Root Winter glycyrrhizin high producing strain28.435
DRR006523Root Summer glycyrrhizin low producing strain41.535
DRR006524Root Summer glycyrrhizin low producing strain41.851
DRR006525Leaf Summer glycyrrhizin high producing strain32.611
DRR006526Leaf Summer glycyrrhizin high producing strain32.460

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.602
SRR2868004Drought Stress(Tissue:root)18.844
SRR2967015Control (Tissue:root)25.710

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.148
SRR9715740Leave21.818
SRR9715741Leave15.693
SRR9715739Root10.423
SRR9715742Root13.493
SRR9715743Root12.812

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.263
SRR8749028MeJA induced 9h6.336
SRR8749029MeJA induced 9h3.708
SRR8749030Uninduced4.638
SRR8749031Uninduced1.053
SRR8749032Uninduced1.256

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.557
SRR8400027Control-Root24.357

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved