Gene detail information of Glyur000276s00017179.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G48260.18.00E-175with no lysine (K) kinase 3
NRCAC84087.10ZIK1 protein [Medicago sativa]
COGYP_004180735.12.00E-21serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
Swissprottr|Q65X23|WNK2_ORYSJ0Probable serine/threonine-protein kinase WNK2
trEMBLtr|Q84RS1|Q84RS1_MEDSA0ZIK1 protein {ECO:0000313|EMBL:CAC84087.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00276192900197220-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.1.5.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000276s00017179.1PF00069.20Pkinase292831.00E-51


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.564
SRR1783600control2.535
SRR1783602moderate drought stress2.670
SRR1811619moderate drought stress2.628

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.743
DRR006520Root Summer glycyrrhizin high producing strain3.661
DRR006521Root Winter glycyrrhizin high producing strain8.515
DRR006522Root Winter glycyrrhizin high producing strain8.215
DRR006523Root Summer glycyrrhizin low producing strain4.476
DRR006524Root Summer glycyrrhizin low producing strain4.563
DRR006525Leaf Summer glycyrrhizin high producing strain3.318
DRR006526Leaf Summer glycyrrhizin high producing strain3.328

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)9.579
SRR2868004Drought Stress(Tissue:root)10.436
SRR2967015Control (Tissue:root)11.039

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.948
SRR9715740Leave5.078
SRR9715741Leave4.629
SRR9715739Root1.535
SRR9715742Root3.898
SRR9715743Root2.503

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.738
SRR8749028MeJA induced 9h12.033
SRR8749029MeJA induced 9h4.814
SRR8749030Uninduced7.324
SRR8749031Uninduced7.896
SRR8749032Uninduced4.343

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.355
SRR8400027Control-Root10.741

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved