Gene detail information of Glyur000277s00017311.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G37050.10Leucine-rich repeat protein kinase family protein
NRXP_006594111.10PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720-like isoform X1 [Glycine max]
COGYP_001958461.13.00E-14hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|C0LGI2|Y1677_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At1g67720 (Precursor)
trEMBLtr|I1LZ06|I1LZ06_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G19960.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002776495780506+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.8.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000277s00017311.1PF12819.2Malectin_like343651.60E-79
Glyur000277s00017311.1PF12799.2LRR_44644997.60E-07
Glyur000277s00017311.1PF00069.20Pkinase6047583.60E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.474
SRR1783600control2.548
SRR1783602moderate drought stress4.097
SRR1811619moderate drought stress4.164

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.246
DRR006520Root Summer glycyrrhizin high producing strain5.678
DRR006521Root Winter glycyrrhizin high producing strain2.274
DRR006522Root Winter glycyrrhizin high producing strain2.154
DRR006523Root Summer glycyrrhizin low producing strain8.388
DRR006524Root Summer glycyrrhizin low producing strain8.106
DRR006525Leaf Summer glycyrrhizin high producing strain2.005
DRR006526Leaf Summer glycyrrhizin high producing strain1.919

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.962
SRR2868004Drought Stress(Tissue:root)18.933
SRR2967015Control (Tissue:root)17.630

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.807
SRR9715740Leave2.844
SRR9715741Leave2.458
SRR9715739Root0.877
SRR9715742Root3.809
SRR9715743Root2.951

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.994
SRR8749028MeJA induced 9h5.617
SRR8749029MeJA induced 9h5.041
SRR8749030Uninduced5.143
SRR8749031Uninduced4.826
SRR8749032Uninduced2.921

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.294
SRR8400027Control-Root7.619

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved