Gene detail information of Glyur000278s00017271.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G14920.10GRAS family transcription factor family protein
NRABI34432.10CRY [Pisum sativum]
Swissprottr|Q8S4W7|GAI1_VITVI0DELLA protein GAI1
trEMBLtr|B2BA71|B2BA71_PEA0CRY {ECO:0000313|EMBL:ABI34432.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0027867838402+


Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

cellular_component

GO:0005634  nucleus


molecular_function

GO:0000989  transcription factor activity, transcription factor binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000278s00017271.1PF12041.3DELLA381083.80E-33
Glyur000278s00017271.1PF03514.9GRAS1695301.40E-135


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control116.973
SRR1783600control118.367
SRR1783602moderate drought stress176.620
SRR1811619moderate drought stress181.694

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain112.585
DRR006520Root Summer glycyrrhizin high producing strain122.623
DRR006521Root Winter glycyrrhizin high producing strain82.704
DRR006522Root Winter glycyrrhizin high producing strain81.500
DRR006523Root Summer glycyrrhizin low producing strain154.715
DRR006524Root Summer glycyrrhizin low producing strain155.644
DRR006525Leaf Summer glycyrrhizin high producing strain51.592
DRR006526Leaf Summer glycyrrhizin high producing strain48.285

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)180.399
SRR2868004Drought Stress(Tissue:root)181.943
SRR2967015Control (Tissue:root)189.793

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave55.866
SRR9715740Leave53.231
SRR9715741Leave55.866
SRR9715739Root153.922
SRR9715742Root132.050
SRR9715743Root132.714

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h63.552
SRR8749028MeJA induced 9h30.173
SRR8749029MeJA induced 9h34.372
SRR8749030Uninduced10.541
SRR8749031Uninduced1.174
SRR8749032Uninduced10.455

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root73.784
SRR8400027Control-Root75.671

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved