Gene detail information of Glyur000279s00013244.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G48380.10BAK1-interacting receptor-like kinase 1
NRXP_004510191.10PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380-like isoform X1 [Cicer arietinum]
COGYP_004775215.12.00E-13RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9ASS4|Y5838_ARATH0Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 (Precursor)
trEMBLtr|A0A072TLE6|A0A072TLE6_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:KEH18041.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002797842580732+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000279s00013244.1PF08263.7LRRNT_230720.00027
Glyur000279s00013244.1PF07714.12Pkinase_Tyr3205906.50E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.099
SRR1783600control16.224
SRR1783602moderate drought stress16.018
SRR1811619moderate drought stress16.059

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.011
DRR006520Root Summer glycyrrhizin high producing strain13.069
DRR006521Root Winter glycyrrhizin high producing strain12.400
DRR006522Root Winter glycyrrhizin high producing strain12.223
DRR006523Root Summer glycyrrhizin low producing strain24.319
DRR006524Root Summer glycyrrhizin low producing strain24.382
DRR006525Leaf Summer glycyrrhizin high producing strain18.924
DRR006526Leaf Summer glycyrrhizin high producing strain19.159

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)21.031
SRR2868004Drought Stress(Tissue:root)36.450
SRR2967015Control (Tissue:root)35.975

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave59.676
SRR9715740Leave53.334
SRR9715741Leave89.127
SRR9715739Root20.738
SRR9715742Root34.059
SRR9715743Root32.172

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.223
SRR8749028MeJA induced 9h15.454
SRR8749029MeJA induced 9h7.875
SRR8749030Uninduced9.064
SRR8749031Uninduced1.969
SRR8749032Uninduced3.003

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root21.433
SRR8400027Control-Root19.934

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved