Gene detail information of Glyur000279s00013247.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G23750.2 | 9.00E-24 | cytokinin response factor 2 |
| NR | XP_003520362.1 | 1.23E-46 | PREDICTED: ethylene-responsive transcription factor CRF4-like [Glycine max] |
| Swissprot | tr|Q9SUE3|CRF4_ARATH | 3.00E-33 | Ethylene-responsive transcription factor CRF4 |
| trEMBL | tr|K7KE10|K7KE10_SOYBN | 5.00E-47 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G23330.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00279 | 97363 | 98250 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000279s00013247.1 | PF00847.15 | AP2 | 110 | 155 | 6.40E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.097 |
| SRR1811619 | moderate drought stress | 0.197 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.606 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.841 |
| SRR2967015 | Control (Tissue:root) | 0.144 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.216 |
| SRR9715740 | Leave | 0.272 |
| SRR9715741 | Leave | 0.097 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.310 |
| SRR9715743 | Root | 0.394 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.047 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.329 |
| SRR8400027 | Control-Root | 0.068 |