Gene detail information of Glyur000279s00013257.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G65940.11.00E-64beta-hydroxyisobutyryl-CoA hydrolase 1
NRXP_004510202.16.45E-119PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase 1-like [Cicer arietinum]
COGYP_002297565.15.00E-25enoyl-CoA hydratase [Rhodospirillum centenum SW]
Swissprottr|Q9LKJ1|HIBC1_ARATH3.00E-783-hydroxyisobutyryl-CoA hydrolase 1
trEMBLtr|A0A072TX02|A0A072TX02_MEDTR1.00E-1133-hydroxyisobutyryl-CoA hydrolase-like protein {ECO:0000313|EMBL:KEH18075.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00279165760167678+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05605HIBCH EC:3.1.2.4 Carbon metabolism map01200
Propanoate metabolismmap00640
Valine, leucine and isoleucine degradationmap00280
beta-Alanine metabolismmap00410


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000279s00013257.1PF13766.1ECH_C561772.00E-35


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control30.217
SRR1783600control30.539
SRR1783602moderate drought stress12.360
SRR1811619moderate drought stress24.370

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain29.142
DRR006520Root Summer glycyrrhizin high producing strain30.922
DRR006521Root Winter glycyrrhizin high producing strain13.558
DRR006522Root Winter glycyrrhizin high producing strain12.034
DRR006523Root Summer glycyrrhizin low producing strain13.673
DRR006524Root Summer glycyrrhizin low producing strain20.318
DRR006525Leaf Summer glycyrrhizin high producing strain13.601
DRR006526Leaf Summer glycyrrhizin high producing strain17.219

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.474
SRR2868004Drought Stress(Tissue:root)9.392
SRR2967015Control (Tissue:root)9.164

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave25.892
SRR9715740Leave19.540
SRR9715741Leave21.664
SRR9715739Root3.004
SRR9715742Root10.194
SRR9715743Root9.230

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h28.359
SRR8749028MeJA induced 9h4.247
SRR8749029MeJA induced 9h35.216
SRR8749030Uninduced47.012
SRR8749031Uninduced36.436
SRR8749032Uninduced40.130

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root23.747
SRR8400027Control-Root14.421

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved