Gene detail information of Glyur000279s00013258.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G03530.10non-specific phospholipase C4
NRKEH18078.10non-specific phospholipase C4 [Medicago truncatula]
COGYP_003881454.17.00E-55phospholipase C 4 [Dickeya dadantii 3937]
Swissprottr|Q9SRQ7|NPC4_ARATH0Non-specific phospholipase C4
trEMBLtr|A0A072TMJ9|A0A072TMJ9_MEDTR0Non-specific phospholipase C4 {ECO:0000313|EMBL:KEH18078.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00279170218173690+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01114plcC EC:3.1.4.3 Inositol phosphate metabolism map00562
Glycerophospholipid metabolismmap00564
Ether lipid metabolismmap00565
Quorum sensingmap02024
Thyroid hormone signaling pathwaymap04919


Gene Ontology

molecular_function

GO:0016788  hydrolase activity, acting on ester bonds



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000279s00013258.2PF04185.9Phosphoesterase503917.00E-94


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.919
SRR1783600control9.189
SRR1783602moderate drought stress7.332
SRR1811619moderate drought stress7.226

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.673
DRR006520Root Summer glycyrrhizin high producing strain19.529
DRR006521Root Winter glycyrrhizin high producing strain0.992
DRR006522Root Winter glycyrrhizin high producing strain1.023
DRR006523Root Summer glycyrrhizin low producing strain11.125
DRR006524Root Summer glycyrrhizin low producing strain10.557
DRR006525Leaf Summer glycyrrhizin high producing strain2.287
DRR006526Leaf Summer glycyrrhizin high producing strain2.117

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.011
SRR2868004Drought Stress(Tissue:root)15.941
SRR2967015Control (Tissue:root)16.947

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.042
SRR9715740Leave5.514
SRR9715741Leave11.907
SRR9715739Root7.885
SRR9715742Root21.682
SRR9715743Root18.100

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.201
SRR8749028MeJA induced 9h0.654
SRR8749029MeJA induced 9h0.504
SRR8749030Uninduced2.352
SRR8749031Uninduced1.651
SRR8749032Uninduced1.367

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root43.571
SRR8400027Control-Root47.242

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved