Gene detail information of Glyur000280s00015689.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G19640.2 | 1.00E-83 | ASH1-related protein 2 |
| NR | XP_003612621.1 | 0 | Histone-lysine N-methyltransferase ASHR2 [Medicago truncatula] |
| Swissprot | tr|Q9ZUM9|ASHR2_ARATH | 7.00E-115 | Histone-lysine N-methyltransferase ASHR2 |
| trEMBL | tr|G7K6V9|G7K6V9_MEDTR | 0 | Histone-lysine N-methyltransferase {ECO:0000313|EMBL:AES95579.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00280 | 55826 | 56923 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | SET |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000280s00015689.1 | PF00856.23 | SET | 17 | 272 | 1.70E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.196 |
| SRR1783600 | control | 15.526 |
| SRR1783602 | moderate drought stress | 17.944 |
| SRR1811619 | moderate drought stress | 17.990 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.506 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.768 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.181 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.597 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.218 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.169 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.896 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.174 |
| SRR2967015 | Control (Tissue:root) | 1.906 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.165 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.162 |
| SRR9715739 | Root | 8.732 |
| SRR9715742 | Root | 7.801 |
| SRR9715743 | Root | 6.618 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.450 |
| SRR8749028 | MeJA induced 9h | 7.145 |
| SRR8749029 | MeJA induced 9h | 3.976 |
| SRR8749030 | Uninduced | 2.342 |
| SRR8749031 | Uninduced | 0.370 |
| SRR8749032 | Uninduced | 0.587 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 7.419 |
| SRR8400027 | Control-Root | 10.464 |