Gene detail information of Glyur000280s00015692.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G19110.10Protein kinase superfamily protein
NRXP_006573477.10PREDICTED: cyclin-dependent kinase F-4-like isoform X2 [Glycine max]
COGYP_008546626.19.00E-23protein kinase [Sulfuricella denitrificans skB26]
Swissprottr|Q6Z8C8|CDKF4_ORYSJ0Cyclin-dependent kinase F-4
trEMBLtr|I1J828|I1J828_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G35190.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002807345781980-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000280s00015692.2PF00069.20Pkinase1333642.10E-59


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control68.733
SRR1783600control69.295
SRR1783602moderate drought stress67.530
SRR1811619moderate drought stress67.150

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain87.514
DRR006520Root Summer glycyrrhizin high producing strain87.745
DRR006521Root Winter glycyrrhizin high producing strain187.753
DRR006522Root Winter glycyrrhizin high producing strain183.240
DRR006523Root Summer glycyrrhizin low producing strain86.019
DRR006524Root Summer glycyrrhizin low producing strain85.609
DRR006525Leaf Summer glycyrrhizin high producing strain57.287
DRR006526Leaf Summer glycyrrhizin high producing strain57.124

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)146.823
SRR2868004Drought Stress(Tissue:root)187.526
SRR2967015Control (Tissue:root)156.119

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave101.082
SRR9715740Leave122.289
SRR9715741Leave122.017
SRR9715739Root21.464
SRR9715742Root86.655
SRR9715743Root75.951

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h93.863
SRR8749028MeJA induced 9h105.889
SRR8749029MeJA induced 9h97.010
SRR8749030Uninduced116.531
SRR8749031Uninduced78.812
SRR8749032Uninduced118.824

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root148.702
SRR8400027Control-Root151.654

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved