Gene detail information of Glyur000281s00018236.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G42630.1 | 1.00E-50 | Homeodomain-like superfamily protein |
| NR | XP_003550354.1 | 2.09E-125 | PREDICTED: probable transcription factor KAN4-like [Glycine max] |
| Swissprot | tr|Q9FJV5|KAN4_ARATH | 3.00E-61 | Probable transcription factor KAN4 |
| trEMBL | tr|I1MXS7|I1MXS7_SOYBN | 8.00E-126 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G36500.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00281 | 43850 | 48503 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
| EAR motif-containing Proteins | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000281s00018236.1 | PF00249.26 | Myb_DNA-binding | 156 | 207 | 1.30E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.577 |
| SRR1783600 | control | 1.739 |
| SRR1783602 | moderate drought stress | 1.159 |
| SRR1811619 | moderate drought stress | 1.185 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.158 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.107 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 8.277 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.359 |
| SRR2967015 | Control (Tissue:root) | 8.335 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 7.340 |
| SRR9715740 | Leave | 4.001 |
| SRR9715741 | Leave | 6.348 |
| SRR9715739 | Root | 0.464 |
| SRR9715742 | Root | 0.226 |
| SRR9715743 | Root | 0.397 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.498 |
| SRR8749028 | MeJA induced 9h | 0.763 |
| SRR8749029 | MeJA induced 9h | 1.343 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.112 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.926 |
| SRR8400027 | Control-Root | 1.394 |