Gene detail information of Glyur000281s00018253.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT3G50060.1 | 7.00E-25 | myb domain protein 77 |
NR | XP_003549412.2 | 2.14E-41 | PREDICTED: myb-like protein A-like [Glycine max] |
Swissprot | tr|Q9FDW1|MYB44_ARATH | 4.00E-28 | Transcription factor MYB44 |
trEMBL | tr|K7MNR7|K7MNR7_SOYBN | 8.00E-42 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G36370.2} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold00281 | 171746 | 172395 | - |
Gene family
Gene family | subfamily |
---|---|
Transcription Factors Family | MYB-related |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
-- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur000281s00018253.1 | PF00249.26 | Myb_DNA-binding | 86 | 128 | 6.20E-13 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 0.154 |
SRR1783600 | control | 0.077 |
SRR1783602 | moderate drought stress | 0.083 |
SRR1811619 | moderate drought stress | 0.264 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 1.159 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 1.741 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 1.527 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 0.865 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.262 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.228 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 0.597 |
SRR2868004 | Drought Stress(Tissue:root) | 0.526 |
SRR2967015 | Control (Tissue:root) | 1.196 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 3.075 |
SRR9715740 | Leave | 0.643 |
SRR9715741 | Leave | 1.960 |
SRR9715739 | Root | 0.228 |
SRR9715742 | Root | 0.829 |
SRR9715743 | Root | 0.750 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 0.459 |
SRR8749028 | MeJA induced 9h | 0.222 |
SRR8749029 | MeJA induced 9h | 0.613 |
SRR8749030 | Uninduced | 0.351 |
SRR8749031 | Uninduced | 0.190 |
SRR8749032 | Uninduced | 0.435 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 0.769 |
SRR8400027 | Control-Root | 0.406 |