Gene detail information of Glyur000281s00018253.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G50060.17.00E-25myb domain protein 77
NRXP_003549412.22.14E-41PREDICTED: myb-like protein A-like [Glycine max]
Swissprottr|Q9FDW1|MYB44_ARATH4.00E-28Transcription factor MYB44
trEMBLtr|K7MNR7|K7MNR7_SOYBN8.00E-42Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G36370.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00281171746172395-


Gene family

Gene familysubfamily
Transcription Factors FamilyMYB-related


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003677  DNA binding

GO:0003682  chromatin binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000281s00018253.1PF00249.26Myb_DNA-binding861286.20E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.154
SRR1783600control0.077
SRR1783602moderate drought stress0.083
SRR1811619moderate drought stress0.264

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.159
DRR006520Root Summer glycyrrhizin high producing strain1.741
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain1.527
DRR006524Root Summer glycyrrhizin low producing strain0.865
DRR006525Leaf Summer glycyrrhizin high producing strain1.262
DRR006526Leaf Summer glycyrrhizin high producing strain1.228

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.597
SRR2868004Drought Stress(Tissue:root)0.526
SRR2967015Control (Tissue:root)1.196

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.075
SRR9715740Leave0.643
SRR9715741Leave1.960
SRR9715739Root0.228
SRR9715742Root0.829
SRR9715743Root0.750

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.459
SRR8749028MeJA induced 9h0.222
SRR8749029MeJA induced 9h0.613
SRR8749030Uninduced0.351
SRR8749031Uninduced0.190
SRR8749032Uninduced0.435

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.769
SRR8400027Control-Root0.406