Gene detail information of Glyur000282s00015750.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G47910.10respiratory burst oxidase homologue D
NRXP_003602726.10Respiratory burst oxidase-like protein [Medicago truncatula]
COGYP_007146260.18.00E-68putative ferric reductase [Cylindrospermum stagnale PCC 7417]
Swissprottr|Q2HXL0|RBOHC_SOLTU0Respiratory burst oxidase homolog protein C
trEMBLtr|G7J2R2|G7J2R2_MEDTR0Respiratory burst oxidase-like protein D {ECO:0000313|EMBL:AES72977.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002822162628180-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13447RBOH EC:1.6.3.- 1.11.1.- MAPK signaling pathway - plant map04016
Plant-pathogen interactionmap04626


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0005509  calcium ion binding

GO:0016491  oxidoreductase activity

GO:0050664  oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000282s00015750.1PF08414.5NADPH_Ox1562561.70E-36
Glyur000282s00015750.1PF13405.1EF-hand_62572820.00012
Glyur000282s00015750.1PF01794.14Ferric_reduct4155718.60E-18
Glyur000282s00015750.1PF08022.7FAD_binding_86147071.20E-30
Glyur000282s00015750.1PF08030.7NAD_binding_67148634.10E-39


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control61.080
SRR1783600control60.803
SRR1783602moderate drought stress71.600
SRR1811619moderate drought stress71.741

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain53.121
DRR006520Root Summer glycyrrhizin high producing strain51.320
DRR006521Root Winter glycyrrhizin high producing strain64.100
DRR006522Root Winter glycyrrhizin high producing strain62.072
DRR006523Root Summer glycyrrhizin low producing strain58.584
DRR006524Root Summer glycyrrhizin low producing strain60.106
DRR006525Leaf Summer glycyrrhizin high producing strain21.785
DRR006526Leaf Summer glycyrrhizin high producing strain21.976

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.836
SRR2868004Drought Stress(Tissue:root)30.065
SRR2967015Control (Tissue:root)42.954

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave30.433
SRR9715740Leave36.255
SRR9715741Leave29.485
SRR9715739Root25.704
SRR9715742Root73.997
SRR9715743Root70.262

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.010
SRR8749028MeJA induced 9h10.714
SRR8749029MeJA induced 9h3.773
SRR8749030Uninduced7.904
SRR8749031Uninduced2.647
SRR8749032Uninduced3.751

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root62.326
SRR8400027Control-Root68.781

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved