Gene detail information of Glyur000286s00016484.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G15070.1 | 0 | Phosphoglycerate mutase-like family protein |
| NR | KEH24959.1 | 0 | phosphoglycerate mutase-like protein [Medicago truncatula] |
| trEMBL | tr|A0A072U5D7|A0A072U5D7_MEDTR | 0 | Phosphoglycerate mutase-like protein {ECO:0000313|EMBL:KEH24959.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00286 | 188 | 22616 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K13024 | PPIP5K, VIP | EC:2.7.4.24 | Phosphatidylinositol signaling system | map04070 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000286s00016484.1 | PF00328.17 | His_Phos_2 | 362 | 958 | 3.40E-110 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.186 |
| SRR1783600 | control | 4.130 |
| SRR1783602 | moderate drought stress | 5.257 |
| SRR1811619 | moderate drought stress | 5.327 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.453 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.309 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.991 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.569 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.566 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.562 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.200 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.593 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 13.468 |
| SRR2868004 | Drought Stress(Tissue:root) | 19.219 |
| SRR2967015 | Control (Tissue:root) | 35.406 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.216 |
| SRR9715740 | Leave | 2.836 |
| SRR9715741 | Leave | 3.809 |
| SRR9715739 | Root | 0.616 |
| SRR9715742 | Root | 3.710 |
| SRR9715743 | Root | 3.571 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.707 |
| SRR8749028 | MeJA induced 9h | 6.522 |
| SRR8749029 | MeJA induced 9h | 3.787 |
| SRR8749030 | Uninduced | 4.424 |
| SRR8749031 | Uninduced | 1.568 |
| SRR8749032 | Uninduced | 3.365 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 12.429 |
| SRR8400027 | Control-Root | 12.227 |