Gene detail information of Glyur000286s00016486.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G62670.10H(+)-ATPase 11
NRXP_002517457.10H(+)-transporting atpase plant/fungi plasma membrane type, putative [Ricinus communis]
COGYP_006722443.14.00E-92cation-translocating P-type ATPase [Geobacter metallireducens GS-15]
Swissprottr|Q9LV11|PMA11_ARATH0ATPase 11, plasma membrane-type
trEMBLtr|B9RUL2|B9RUL2_RICCO0H(+)-transporting atpase plant/fungi plasma membrane type, putative {ECO:0000313|EMBL:EEF44999.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002862707135157+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01535PMA1, PMA2 EC:3.6.3.6 Oxidative phosphorylation map00190


Gene Ontology

cellular_component

GO:0016021  integral component of membrane


molecular_function

GO:0000166  nucleotide binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000286s00016486.1PF00690.21Cation_ATPase_N20838.10E-14
Glyur000286s00016486.1PF00702.21Hydrolase2613842.40E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control37.573
SRR1783600control38.065
SRR1783602moderate drought stress64.789
SRR1811619moderate drought stress64.078

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain46.848
DRR006520Root Summer glycyrrhizin high producing strain47.383
DRR006521Root Winter glycyrrhizin high producing strain37.092
DRR006522Root Winter glycyrrhizin high producing strain36.353
DRR006523Root Summer glycyrrhizin low producing strain60.349
DRR006524Root Summer glycyrrhizin low producing strain59.725
DRR006525Leaf Summer glycyrrhizin high producing strain5.586
DRR006526Leaf Summer glycyrrhizin high producing strain5.466

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)52.817
SRR2868004Drought Stress(Tissue:root)44.393
SRR2967015Control (Tissue:root)48.928

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave22.990
SRR9715740Leave35.935
SRR9715741Leave50.930
SRR9715739Root13.698
SRR9715742Root73.075
SRR9715743Root62.928

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.857
SRR8749028MeJA induced 9h12.426
SRR8749029MeJA induced 9h3.922
SRR8749030Uninduced18.396
SRR8749031Uninduced4.183
SRR8749032Uninduced6.564

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root85.189
SRR8400027Control-Root49.185

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved