Gene detail

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Gene detail information of Glyur000286s00016501.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G17430.1	7.00E-53	Integrase-type DNA-binding superfamily protein
NR	XP_004489378.1	1.56E-168	PREDICTED: ethylene-responsive transcription factor WRI1-like [Cicer arietinum]
Swissprot	tr\|Q8LSN2\|BBM2_BRANA	1.00E-60	AP2-like ethylene-responsive transcription factor BBM2
trEMBL	tr\|A0A072U7A0\|A0A072U7A0_MEDTR	2.00E-162	AP2 domain transcription factor {ECO:0000313\|EMBL:KEH24983.1}

Sequence

Transcript Sequence

>Glyur000286s00016501.1
ATGGAAATGATGCTAAAGAATGAAGAGAACAAGAGAAGGAGCTGCATGTTCATGGCTGAAGGTGAGTTTCAAGTGGTTGCCAAGAGACGACGAAGAGAGCCTGCAGCAGCAACTGCACTTACTCAGAAGCAACAACAAGTTGATAATCAAAATTCTAGCAGCAGCACCACAAAGAGAAGTTCAAGGTTTCGGGGGGCTTATGATGAAGAAGAATCAGCAGCCAGAGCATATGATTTGGCTGCACTTAAGTACTGGGGAACATCGACTTCCACCAACTTTCCTATCTCAGAGTACGAGGAGCAGATAGAGATAATGAAAACTATGACAAAAGAGGGGTACTTGGCCACCTTAAGGAGAAAGAGCAGTGGCTTTTCAAGAGGCGCATCAAAGTATAGGGGTGTTGCAAGGCACCACCACAATGGTAGATGGGAAGCACGGATTGGGAGGGTCTTTGGAAACAAATATCTATACCTTGGCACCTACAGTACCCAAGAGGAAGCTGCTCGTGCTTATGACATAGCGGCCATTGAGTACAGAGGAAACCACGCGGTAACCAACTTCGACTTGAGTACTTACATAAGATGGTTAAAACCTTCAGCAGGAAGCATCTCAGAAACAAAACTTGAAACAAATGTAGTACCAGAGTCTCAGACAGTGGCATCCCAGTCTAACTATTCTCCAATAGAGGGGTCAAAATCCTTGGCCCTTCACAGCAGTATACACAATTCAGATTATCTGAATTCCCCTCAAAAGCATGAAGCCTTTGAAAACAAAACATACCAAATCTCAAGCACTAAGTCATCTTCTCCCACTGCACTTGGGCTCCTTTTCCGCTCTACAATATTTAGAGAATTAGTTGAAAAGAATTTAAACATATCTGGAGATGAAACTGATGGGGAAGACGCAAAGAATCAACAGCCACAGACAGCTGGTGATGATGAGTTGGTTGGGATCTTCTATGATGGAACTGGCAATACCCCTTTCTGTGATCCCAATAGAGACTACTTAGAAATGCAAGAAAGAGACATGCACTCCATTTTCCNAAATGGGTAG

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00286	80811	83008	-

Gene family

Gene family	subfamily
Transcription Factors Family	ERF

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function GO:0003677 DNA binding GO:0003700 transcription factor activity, sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000286s00016501.1	PF00847.15	AP2	129	181	2.20E-14

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.153
SRR1783600	control	0.119
SRR1783602	moderate drought stress	0.137
SRR1811619	moderate drought stress	0.080

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.161
DRR006520	Root Summer glycyrrhizin high producing strain	0.203
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.582
DRR006524	Root Summer glycyrrhizin low producing strain	0.494
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.000
SRR2868004	Drought Stress(Tissue:root)	0.062
SRR2967015	Control (Tissue:root)	0.079

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.000
SRR9715740	Leave	0.026
SRR9715741	Leave	0.000
SRR9715739	Root	0.000
SRR9715742	Root	0.016
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.072
SRR8749028	MeJA induced 9h	0.045
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.129
SRR8749031	Uninduced	0.057
SRR8749032	Uninduced	0.037

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.035
SRR8400027	Control-Root	0.049