Gene detail information of Glyur000287s00022142.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G23850.1 | 0 | Arabidopsis thaliana protein of unknown function (DUF821) |
| NR | XP_004514091.1 | 0 | PREDICTED: O-glucosyltransferase rumi homolog isoform X1 [Cicer arietinum] |
| trEMBL | tr|A0A072TVA2|A0A072TVA2_MEDTR | 0 | Glycosyltransferase family 90 protein {ECO:0000313|EMBL:KEH17460.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00287 | 73063 | 86705 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT90 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000287s00022142.1 | PF05686.7 | Glyco_transf_90 | 119 | 515 | 4.00E-192 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.958 |
| SRR1783600 | control | 28.869 |
| SRR1783602 | moderate drought stress | 32.172 |
| SRR1811619 | moderate drought stress | 31.984 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 34.160 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 34.279 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 37.143 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 35.499 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.158 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.311 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.871 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.674 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 26.717 |
| SRR2868004 | Drought Stress(Tissue:root) | 15.332 |
| SRR2967015 | Control (Tissue:root) | 25.753 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.339 |
| SRR9715740 | Leave | 4.930 |
| SRR9715741 | Leave | 2.071 |
| SRR9715739 | Root | 3.956 |
| SRR9715742 | Root | 17.115 |
| SRR9715743 | Root | 14.568 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 52.562 |
| SRR8749028 | MeJA induced 9h | 74.215 |
| SRR8749029 | MeJA induced 9h | 85.398 |
| SRR8749030 | Uninduced | 78.865 |
| SRR8749031 | Uninduced | 77.385 |
| SRR8749032 | Uninduced | 82.353 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 40.288 |
| SRR8400027 | Control-Root | 41.950 |