Gene detail information of Glyur000288s00019877.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G49570.12.00E-34Peroxidase superfamily protein
NRXP_003601028.11.12E-136Peroxidase [Medicago truncatula]
Swissprottr|P15233|PER1C_ARMRU8.00E-61Peroxidase C1C (Precursor; Fragment)
trEMBLtr|G7J2Y6|G7J2Y6_MEDTR4.00E-137Peroxidase family protein {ECO:0000313|EMBL:AES71279.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00288158271160381+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000288s00019877.1PF00141.18peroxidase451211.90E-18
Glyur000288s00019877.1PF00141.18peroxidase1292211.80E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control89.587
SRR1783600control88.758
SRR1783602moderate drought stress60.843
SRR1811619moderate drought stress61.498

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain130.031
DRR006520Root Summer glycyrrhizin high producing strain128.109
DRR006521Root Winter glycyrrhizin high producing strain0.394
DRR006522Root Winter glycyrrhizin high producing strain0.343
DRR006523Root Summer glycyrrhizin low producing strain34.523
DRR006524Root Summer glycyrrhizin low producing strain34.964
DRR006525Leaf Summer glycyrrhizin high producing strain28.347
DRR006526Leaf Summer glycyrrhizin high producing strain28.215

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.489
SRR2868004Drought Stress(Tissue:root)5.098
SRR2967015Control (Tissue:root)5.500

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.168
SRR9715740Leave2.516
SRR9715741Leave2.901
SRR9715739Root10.316
SRR9715742Root34.009
SRR9715743Root29.677

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.058
SRR8749028MeJA induced 9h0.191
SRR8749029MeJA induced 9h0.208
SRR8749030Uninduced0.106
SRR8749031Uninduced0.000
SRR8749032Uninduced0.043

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root137.067
SRR8400027Control-Root144.210

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved