Gene detail information of Glyur000289s00018722.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G01070.1 | 5.00E-36 | UDP-Glycosyltransferase superfamily protein |
| NR | XP_003620191.1 | 0 | Anthocyanidin 3-O-glucosyltransferase [Medicago truncatula] |
| COG | YP_004958904.1 | 1.00E-09 | MGT family glycosyltransferase [Streptomyces bingchenggensis BCW-1] |
| Swissprot | tr|Q9LML6|U71C4_ARATH | 2.00E-49 | UDP-glycosyltransferase 71C4 |
| trEMBL | tr|G7KKR3|G7KKR3_MEDTR | 0 | UDP-glucosyltransferase family protein {ECO:0000313|EMBL:AES76409.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00289 | 104010 | 106690 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000289s00018722.1 | PF00201.13 | UDPGT | 276 | 413 | 1.90E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.312 |
| SRR1783600 | control | 12.629 |
| SRR1783602 | moderate drought stress | 6.840 |
| SRR1811619 | moderate drought stress | 6.891 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.195 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.190 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.276 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.318 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.264 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.491 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.031 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.371 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 35.623 |
| SRR2868004 | Drought Stress(Tissue:root) | 29.923 |
| SRR2967015 | Control (Tissue:root) | 24.713 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 14.196 |
| SRR9715740 | Leave | 0.380 |
| SRR9715741 | Leave | 5.634 |
| SRR9715739 | Root | 4.036 |
| SRR9715742 | Root | 19.605 |
| SRR9715743 | Root | 15.248 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.632 |
| SRR8749028 | MeJA induced 9h | 13.207 |
| SRR8749029 | MeJA induced 9h | 7.427 |
| SRR8749030 | Uninduced | 3.746 |
| SRR8749031 | Uninduced | 2.593 |
| SRR8749032 | Uninduced | 3.385 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 25.068 |
| SRR8400027 | Control-Root | 27.576 |