Gene detail information of Glyur000289s00018725.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G01070.1 | 5.00E-35 | UDP-Glycosyltransferase superfamily protein |
| NR | XP_003620191.1 | 0 | Anthocyanidin 3-O-glucosyltransferase [Medicago truncatula] |
| COG | YP_004958904.1 | 1.00E-09 | MGT family glycosyltransferase [Streptomyces bingchenggensis BCW-1] |
| Swissprot | tr|Q2V6K0|UFOG6_FRAAN | 4.00E-50 | UDP-glucose flavonoid 3-O-glucosyltransferase 6 {ECO:0000303|PubMed:18487633} |
| trEMBL | tr|G7KKR3|G7KKR3_MEDTR | 0 | UDP-glucosyltransferase family protein {ECO:0000313|EMBL:AES76409.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00289 | 124779 | 127556 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000289s00018725.1 | PF00201.13 | UDPGT | 297 | 467 | 1.40E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 39.347 |
| SRR1783600 | control | 39.643 |
| SRR1783602 | moderate drought stress | 57.805 |
| SRR1811619 | moderate drought stress | 57.350 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.572 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.812 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.124 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.060 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.544 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.123 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.074 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 15.567 |
| SRR2868004 | Drought Stress(Tissue:root) | 9.447 |
| SRR2967015 | Control (Tissue:root) | 13.739 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.391 |
| SRR9715740 | Leave | 0.008 |
| SRR9715741 | Leave | 0.151 |
| SRR9715739 | Root | 58.093 |
| SRR9715742 | Root | 29.379 |
| SRR9715743 | Root | 35.077 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.311 |
| SRR8749028 | MeJA induced 9h | 0.091 |
| SRR8749029 | MeJA induced 9h | 0.189 |
| SRR8749030 | Uninduced | 0.053 |
| SRR8749031 | Uninduced | 0.029 |
| SRR8749032 | Uninduced | 0.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 68.756 |
| SRR8400027 | Control-Root | 88.175 |