Gene detail information of Glyur000290s00015805.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G08490.10chloroplastic NIFS-like cysteine desulfurase
NRXP_004502227.10PREDICTED: cysteine desulfurase 2, chloroplastic-like [Cicer arietinum]
COGYP_007156093.10cysteine desulfurase [Anabaena cylindrica PCC 7122]
Swissprottr|Q93WX6|NFS2_ARATH0Cysteine desulfurase 2, chloroplastic (Precursor)
trEMBLtr|I1L0B9|I1L0B9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G02450.5}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00290151411157444-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K11717sufS EC:2.8.1.7 4.4.1.16 Selenocompound metabolism map00450


Gene Ontology

biological_process

GO:0006534  cysteine metabolic process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0030170  pyridoxal phosphate binding

GO:0031071  cysteine desulfurase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000290s00015805.1PF00266.14Aminotran_5834576.50E-146


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.663
SRR1783600control21.847
SRR1783602moderate drought stress19.049
SRR1811619moderate drought stress19.325

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.243
DRR006520Root Summer glycyrrhizin high producing strain24.129
DRR006521Root Winter glycyrrhizin high producing strain13.380
DRR006522Root Winter glycyrrhizin high producing strain12.947
DRR006523Root Summer glycyrrhizin low producing strain27.997
DRR006524Root Summer glycyrrhizin low producing strain28.199
DRR006525Leaf Summer glycyrrhizin high producing strain48.576
DRR006526Leaf Summer glycyrrhizin high producing strain48.380

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)25.346
SRR2868004Drought Stress(Tissue:root)26.846
SRR2967015Control (Tissue:root)24.609

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave54.848
SRR9715740Leave75.326
SRR9715741Leave52.533
SRR9715739Root13.456
SRR9715742Root15.663
SRR9715743Root15.254

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.686
SRR8749028MeJA induced 9h19.317
SRR8749029MeJA induced 9h10.099
SRR8749030Uninduced12.802
SRR8749031Uninduced6.969
SRR8749032Uninduced5.722

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root34.320
SRR8400027Control-Root31.744

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved