Gene detail information of Glyur000291s00016208.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G51590.10alpha-mannosidase 1
NRXP_007142125.10hypothetical protein PHAVU_008G254800g [Phaseolus vulgaris]
Swissprottr|Q9C512|MNS1_ARATH0Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1
trEMBLtr|V7B8F8|V7B8F8_PHAVU0alpha-1,2-Mannosidase {ECO:0000256|RuleBase:RU361193}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002912703334510+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH47


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01230MAN1 EC:3.2.1.113 N-Glycan biosynthesis map00510
Various types of N-glycan biosynthesismap00513
Protein processing in endoplasmic reticulummap04141


Gene Ontology

cellular_component

GO:0016020  membrane


molecular_function

GO:0004571  mannosyl-oligosaccharide 1,2-alpha-mannosidase activity

GO:0005509  calcium ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000291s00016208.1PF01532.15Glyco_hydro_471155462.10E-158


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.633
SRR1783600control25.777
SRR1783602moderate drought stress20.367
SRR1811619moderate drought stress20.650

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain31.698
DRR006520Root Summer glycyrrhizin high producing strain31.091
DRR006521Root Winter glycyrrhizin high producing strain56.203
DRR006522Root Winter glycyrrhizin high producing strain54.564
DRR006523Root Summer glycyrrhizin low producing strain30.589
DRR006524Root Summer glycyrrhizin low producing strain30.444
DRR006525Leaf Summer glycyrrhizin high producing strain23.570
DRR006526Leaf Summer glycyrrhizin high producing strain23.449

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)57.309
SRR2868004Drought Stress(Tissue:root)54.999
SRR2967015Control (Tissue:root)57.037

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave35.718
SRR9715740Leave36.558
SRR9715741Leave41.681
SRR9715739Root11.696
SRR9715742Root31.911
SRR9715743Root29.059

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h36.804
SRR8749028MeJA induced 9h60.748
SRR8749029MeJA induced 9h27.868
SRR8749030Uninduced28.665
SRR8749031Uninduced27.195
SRR8749032Uninduced18.040

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root51.428
SRR8400027Control-Root49.260

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved