Gene detail information of Glyur000294s00011850.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G58220.1 | 1.00E-49 | Homeodomain-like superfamily protein |
| NR | XP_006578284.1 | 0 | PREDICTED: uncharacterized protein LOC100805773 isoform X2 [Glycine max] |
| trEMBL | tr|K7KJ58|K7KJ58_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G10185.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00294 | 21643 | 27657 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB-related |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000294s00011850.1 | PF00249.26 | Myb_DNA-binding | 203 | 248 | 2.70E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.115 |
| SRR1783600 | control | 10.348 |
| SRR1783602 | moderate drought stress | 11.805 |
| SRR1811619 | moderate drought stress | 11.977 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.276 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.888 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.017 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.405 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.542 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.877 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.667 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.699 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 12.970 |
| SRR2868004 | Drought Stress(Tissue:root) | 12.646 |
| SRR2967015 | Control (Tissue:root) | 15.341 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 7.482 |
| SRR9715740 | Leave | 10.247 |
| SRR9715741 | Leave | 9.564 |
| SRR9715739 | Root | 1.121 |
| SRR9715742 | Root | 6.255 |
| SRR9715743 | Root | 5.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.261 |
| SRR8749028 | MeJA induced 9h | 13.009 |
| SRR8749029 | MeJA induced 9h | 8.978 |
| SRR8749030 | Uninduced | 6.868 |
| SRR8749031 | Uninduced | 6.136 |
| SRR8749032 | Uninduced | 5.009 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 15.979 |
| SRR8400027 | Control-Root | 15.482 |