Gene detail information of Glyur000294s00011858.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G24530.1 | 0 | O-fucosyltransferase family protein |
| NR | XP_003523785.1 | 0 | PREDICTED: uncharacterized protein At1g04910-like [Glycine max] |
| Swissprot | tr|Q8W486|Y1491_ARATH | 3.00E-77 | Uncharacterized protein At1g04910 |
| trEMBL | tr|I1JV62|I1JV62_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G10040.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00294 | 70955 | 74591 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GTnc |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000294s00011858.1 | PF10250.4 | O-FucT | 108 | 455 | 4.20E-83 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.551 |
| SRR1783600 | control | 15.443 |
| SRR1783602 | moderate drought stress | 16.796 |
| SRR1811619 | moderate drought stress | 16.701 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.776 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.506 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 25.353 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 24.708 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.780 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 21.917 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.925 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 19.150 |
| SRR2868004 | Drought Stress(Tissue:root) | 18.638 |
| SRR2967015 | Control (Tissue:root) | 22.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 14.773 |
| SRR9715740 | Leave | 15.394 |
| SRR9715741 | Leave | 16.593 |
| SRR9715739 | Root | 8.671 |
| SRR9715742 | Root | 14.811 |
| SRR9715743 | Root | 13.052 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.250 |
| SRR8749028 | MeJA induced 9h | 18.801 |
| SRR8749029 | MeJA induced 9h | 12.239 |
| SRR8749030 | Uninduced | 13.362 |
| SRR8749031 | Uninduced | 11.184 |
| SRR8749032 | Uninduced | 10.778 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 19.900 |
| SRR8400027 | Control-Root | 19.861 |