Gene detail information of Glyur000294s00011863.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G09730.2 | 1.00E-136 | Cysteine proteinases superfamily protein |
| NR | KHN08258.1 | 0 | Putative ubiquitin-like-specific protease 2B [Glycine soja] |
| Swissprot | tr|Q8L7S0|ULP2B_ARATH | 4.00E-171 | Probable ubiquitin-like-specific protease 2B |
| trEMBL | tr|K7KJ35|K7KJ35_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G09965.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00294 | 96031 | 103376 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Ubiquitin Family | ULP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000294s00011863.1 | PF02902.14 | Peptidase_C48 | 379 | 567 | 5.00E-38 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.128 |
| SRR1783600 | control | 14.134 |
| SRR1783602 | moderate drought stress | 15.957 |
| SRR1811619 | moderate drought stress | 15.984 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.642 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.634 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.421 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.026 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.078 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.295 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.867 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.170 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 20.713 |
| SRR2868004 | Drought Stress(Tissue:root) | 24.062 |
| SRR2967015 | Control (Tissue:root) | 26.396 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 15.277 |
| SRR9715740 | Leave | 16.195 |
| SRR9715741 | Leave | 21.409 |
| SRR9715739 | Root | 6.063 |
| SRR9715742 | Root | 14.549 |
| SRR9715743 | Root | 12.587 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.215 |
| SRR8749028 | MeJA induced 9h | 17.045 |
| SRR8749029 | MeJA induced 9h | 8.205 |
| SRR8749030 | Uninduced | 14.053 |
| SRR8749031 | Uninduced | 10.425 |
| SRR8749032 | Uninduced | 8.995 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 19.830 |
| SRR8400027 | Control-Root | 18.857 |