Gene detail information of Glyur000295s00015284.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G21750.20Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
NRXP_007157166.10hypothetical protein PHAVU_002G048200g [Phaseolus vulgaris]
Swissprottr|Q8RWU4|ATML1_ARATH0Homeobox-leucine zipper protein MERISTEM L1
trEMBLtr|V7CIR7|V7CIR7_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW29160.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002951039513888-


Gene family

Gene familysubfamily
Transcription Factors FamilyHB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0008289  lipid binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000295s00015284.1PF00046.24Homeobox46962.40E-17
Glyur000295s00015284.1PF01852.14START2054211.10E-59


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.055
SRR1783600control0.056
SRR1783602moderate drought stress0.037
SRR1811619moderate drought stress0.021

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.052
DRR006520Root Summer glycyrrhizin high producing strain0.052
DRR006521Root Winter glycyrrhizin high producing strain0.105
DRR006522Root Winter glycyrrhizin high producing strain0.106
DRR006523Root Summer glycyrrhizin low producing strain0.127
DRR006524Root Summer glycyrrhizin low producing strain0.161
DRR006525Leaf Summer glycyrrhizin high producing strain0.090
DRR006526Leaf Summer glycyrrhizin high producing strain0.135

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.388
SRR2868004Drought Stress(Tissue:root)0.181
SRR2967015Control (Tissue:root)0.183

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.366
SRR9715740Leave0.673
SRR9715741Leave0.558
SRR9715739Root0.001
SRR9715742Root0.171
SRR9715743Root0.238

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.027
SRR8749030Uninduced0.091
SRR8749031Uninduced0.570
SRR8749032Uninduced0.444

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.033
SRR8400027Control-Root0.156

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved