Gene detail information of Glyur000295s00015295.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G05200.1 | 2.00E-40 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25 |
| NR | XP_003610653.1 | 3.75E-142 | Cysteine-rich receptor-like protein kinase [Medicago truncatula] |
| Swissprot | tr|Q9M0X5|CRK25_ARATH | 3.00E-50 | Cysteine-rich receptor-like protein kinase 25 (Precursor) |
| trEMBL | tr|G7K103|G7K103_MEDTR | 1.00E-142 | Cysteine-rich receptor-kinase-like protein {ECO:0000313|EMBL:AES93611.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00295 | 75608 | 79025 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.7.2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000295s00015295.1 | PF01657.12 | Stress-antifung | 42 | 140 | 5.20E-23 |
| Glyur000295s00015295.1 | PF01657.12 | Stress-antifung | 166 | 258 | 2.10E-21 |
| Glyur000295s00015295.1 | PF07714.12 | Pkinase_Tyr | 313 | 422 | 1.10E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.030 |
| SRR1783600 | control | 5.018 |
| SRR1783602 | moderate drought stress | 4.754 |
| SRR1811619 | moderate drought stress | 4.936 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.126 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.127 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.183 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.202 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.324 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.305 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.399 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 3.908 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.174 |
| SRR2967015 | Control (Tissue:root) | 10.122 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.865 |
| SRR9715740 | Leave | 3.299 |
| SRR9715741 | Leave | 3.608 |
| SRR9715739 | Root | 0.196 |
| SRR9715742 | Root | 0.855 |
| SRR9715743 | Root | 0.764 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.487 |
| SRR8749028 | MeJA induced 9h | 9.532 |
| SRR8749029 | MeJA induced 9h | 6.839 |
| SRR8749030 | Uninduced | 19.829 |
| SRR8749031 | Uninduced | 13.250 |
| SRR8749032 | Uninduced | 7.069 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.571 |
| SRR8400027 | Control-Root | 3.782 |