Gene detail information of Glyur000296s00018752.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G55120.1 | 6.00E-95 | beta-fructofuranosidase 5 |
| NR | XP_006601227.1 | 1.65E-179 | PREDICTED: fructan 6-exohydrolase-like [Glycine max] |
| COG | YP_001792320.1 | 3.00E-33 | Beta-fructofuranosidase [Leptothrix cholodnii SP-6] |
| Swissprot | tr|Q67XZ3|INV3_ARATH | 4.00E-113 | Beta-fructofuranosidase, insoluble isoenzyme CWINV3 (Precursor) |
| trEMBL | tr|I1MX99|I1MX99_SOYBN | 6.00E-180 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G34570.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00296 | 82667 | 84969 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GH32 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01193 | INV, sacA | EC:3.2.1.26 | Galactose metabolism | map00052 |
| Starch and sucrose metabolism | map00500 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000296s00018752.1 | PF00251.15 | Glyco_hydro_32N | 31 | 320 | 1.30E-86 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.452 |
| SRR1783600 | control | 0.545 |
| SRR1783602 | moderate drought stress | 0.077 |
| SRR1811619 | moderate drought stress | 0.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 39.104 |
| SRR2868004 | Drought Stress(Tissue:root) | 86.866 |
| SRR2967015 | Control (Tissue:root) | 102.131 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.067 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.066 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.052 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.970 |
| SRR8749028 | MeJA induced 9h | 2.046 |
| SRR8749029 | MeJA induced 9h | 4.250 |
| SRR8749030 | Uninduced | 6.985 |
| SRR8749031 | Uninduced | 38.126 |
| SRR8749032 | Uninduced | 4.622 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 6.138 |
| SRR8400027 | Control-Root | 9.390 |