Gene detail information of Glyur000297s00023388.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G68020.20UDP-Glycosyltransferase / trehalose-phosphatase family protein
NRXP_003529226.10PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6-like [Glycine max]
COGYP_006545085.11.00E-134alpha,alpha-trehalose-phosphate synthase (UDP-forming) [Methanoculleus bourgensis MS2]
Swissprottr|Q94AH8|TPS6_ARATH0Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6
trEMBLtr|K7L2B3|K7L2B3_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G26980.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold002975607060352-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT20


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K16055TPS EC:2.4.1.15 3.1.3.12 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005992  trehalose biosynthetic process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000297s00023388.1PF00982.16Glyco_transf_20615493.30E-182
Glyur000297s00023388.1PF02358.11Trehalose_PPase6008333.70E-77


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control29.625
SRR1783600control29.992
SRR1783602moderate drought stress43.007
SRR1811619moderate drought stress42.862

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain51.547
DRR006520Root Summer glycyrrhizin high producing strain50.914
DRR006521Root Winter glycyrrhizin high producing strain91.047
DRR006522Root Winter glycyrrhizin high producing strain88.919
DRR006523Root Summer glycyrrhizin low producing strain77.153
DRR006524Root Summer glycyrrhizin low producing strain76.812
DRR006525Leaf Summer glycyrrhizin high producing strain23.886
DRR006526Leaf Summer glycyrrhizin high producing strain24.091

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)58.146
SRR2868004Drought Stress(Tissue:root)96.848
SRR2967015Control (Tissue:root)148.801

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave48.783
SRR9715740Leave55.816
SRR9715741Leave65.539
SRR9715739Root37.047
SRR9715742Root75.447
SRR9715743Root72.413

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h50.241
SRR8749028MeJA induced 9h125.876
SRR8749029MeJA induced 9h73.901
SRR8749030Uninduced37.437
SRR8749031Uninduced84.911
SRR8749032Uninduced49.378

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root51.920
SRR8400027Control-Root49.859

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved